RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CLDN9O95484 217 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF682O95780 498 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 IFNA14P01570 189 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 IGLV3-27P01718 113 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 HLA-DQB1P01920 261 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 SYPP08247 313 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 NAT2P11245 290 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 CPEP16870 476 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF7P17097 686 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 C21orf33P30042 268 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 CSTF2P33240 577 aaKnown RBP eCLIP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 PCGF2P35227 344 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 KIR3DL1P43629 444 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 GPR15P49685 360 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 CDC42P60953 191 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 SIM1P81133 766 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 RUNX1T1Q06455 604 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ST3GAL4Q11206 333 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 FAPQ12884 760 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 RIN1Q13671 783 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 PTGR1Q14914 329 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 DHCR24Q15392 516 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 MICAQ29983 383 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 UAP1L1Q3KQV9 507 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 GLYR1Q49A26 553 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 SLC25A30Q5SVS4 291 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ANXA8L1Q5VT79 327 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 PLAG1Q6DJT9 500 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 FBXL22Q6P050 247 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 DOK6Q6PKX4 331 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 SUSD1Q6UWL2 747 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF782Q6ZMW2 699 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 GLT6D1Q7Z4J2 308 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 CAMKMTQ7Z624 323 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 PTOV1Q86YD1 416 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 CCDC28AQ8IWP9 274 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 SLC30A8Q8IWU4 369 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 PHACTR4Q8IZ21 702 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 SLC22A15Q8IZD6 547 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 OR8H2Q8N162 312 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 FAM109AQ8N4B1 249 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 NAT16Q8N8M0 369 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 L3MBTL4Q8NA19 623 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 SIDT2Q8NBJ9 832 aaKnown RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 OR4C15Q8NGM1 316 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ASB15Q8WXK1 588 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 BARD1Q99728 777 aaKnown RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 SOSTQ9BQB4 213 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 CENPOQ9BU64 300 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 TPSD1Q9BZJ3 242 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ZDHHC5Q9C0B5 715 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 OR51E2Q9H255 320 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF556Q9HAH1 456 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 TLR8Q9NR97 1041 aaKnown RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 CLN6Q9NWW5 311 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF226Q9NYT6 803 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 DKK4Q9UBT3 224 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 SUSD2Q9UGT4 822 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 RALYQ9UKM9 306 aaKnown RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 AGO1Q9UL18 857 aaKnown RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF490Q9ULM2 529 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.28□□□□□ -1.24
CCDC60-204ENST00000539847 U3KQV3 271 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 V9GYH0 126 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 PLXND1Q9Y4D7 1925 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 THADAQ6YHU6 1953 aa7.28□□□□□ -1.24
CCDC60-204ENST00000539847 ITPR1Q14643 2758 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 KNTC1P50748 2209 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 IGSF10Q6WRI0 2623 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 LINC00862A6NCI5 91 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 KRT87PA6NCN2 255 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 NCF1BA6NI72 391 aaPredicted RBP7.27□□□□□ -1.25
CCDC60-204ENST00000539847 NCF1CA8MVU1 366 aaPredicted RBP7.27□□□□□ -1.25
CCDC60-204ENST00000539847 ANKRD66B4E2M5 251 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 ZNF670-ZNF695F2Z2N8 137 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 TNFRSF11BO00300 401 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 CCL22O00626 93 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 CTDSP2O14595 271 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 BET1O15155 118 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 SLC16A5O15375 505 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 HYAL3O43820 417 aaPredicted RBP7.27□□□□□ -1.25
CCDC60-204ENST00000539847 UGDHO60701 494 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 SCN2BO60939 215 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 ZNF780AO75290 641 aaPredicted RBP7.27□□□□□ -1.25
CCDC60-204ENST00000539847 NIPSNAP2O75323 286 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 STK16O75716 305 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 CYP7B1O75881 506 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 RASGRP1O95267 797 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 KLF8O95600 359 aaPredicted RBP7.27□□□□□ -1.25
CCDC60-204ENST00000539847 PRLP01236 227 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 CTSBP07858 339 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 STSP08842 583 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 EPXP11678 715 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 HSD3B1P14060 373 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 SPINK2P20155 84 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 MYL9P24844 172 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 PSMA1P25786 263 aaKnown RBP7.27□□□□□ -1.25
CCDC60-204ENST00000539847 MC4RP32245 332 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 IFNA8P32881 189 aa7.27□□□□□ -1.25
CCDC60-204ENST00000539847 GRK5P34947 590 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms