RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 TMEM25Q86YD3 366 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 OR8J1Q8NGP2 316 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 CXorf40BQ96DE9 158 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 METTL2AQ96IZ6 378 aaKnown RBP19.23■□□□□ 0.67
TMEM260-203ENST00000539559 PRR14Q9BWN1 585 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 MRPL17Q9NRX2 175 aaKnown RBP19.23■□□□□ 0.67
TMEM260-203ENST00000539559 HCN2Q9UL51 889 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 INSL5Q9Y5Q6 135 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 SLC5A10A0PJK1 596 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 LEFTY1O75610 366 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 C1orf105O95561 183 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 CHRNEQ04844 493 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 TMEM115Q12893 351 aaPredicted RBP19.23■□□□□ 0.67
TMEM260-203ENST00000539559 ELOAQ14241 798 aaKnown RBP19.23■□□□□ 0.67
TMEM260-203ENST00000539559 GINS1Q14691 196 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 QPRTQ15274 297 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 SYT14P1Q58G82 188 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 ZNF557Q8N988 423 aaPredicted RBP19.23■□□□□ 0.67
TMEM260-203ENST00000539559 DTX3Q8N9I9 347 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 CYB5D2Q8WUJ1 264 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 BTN2A2Q8WVV5 523 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 MSLNLQ96KJ4 702 aa19.23■□□□□ 0.67
TMEM260-203ENST00000539559 ATG13O75143 517 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 NME6O75414 186 aaPredicted RBP19.22■□□□□ 0.67
TMEM260-203ENST00000539559 C1GALT1C1LP0DN25 315 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 EPHB3P54753 998 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 ARSIQ5FYB1 569 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 TMEM201Q5SNT2 666 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 DDI2Q5TDH0 399 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 TYW3Q6IPR3 259 aaKnown RBP19.22■□□□□ 0.67
TMEM260-203ENST00000539559 TCEAL8Q8IYN2 117 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 OR2A12Q8NGT7 310 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 TRIM43Q96BQ3 446 aaPredicted RBP19.22■□□□□ 0.67
TMEM260-203ENST00000539559 PDXPQ96GD0 296 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 SLA2Q9H6Q3 261 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 MYNNQ9NPC7 610 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 ACOXLQ9NUZ1 547 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 NLKQ9UBE8 527 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 CCL26Q9Y258 94 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 HS3ST2Q9Y278 367 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 DYRK1BQ9Y463 629 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 ALG5Q9Y673 324 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 WASHC1A8K0Z3 465 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 TPD52L2O43399 206 aaKnown RBP19.22■□□□□ 0.67
TMEM260-203ENST00000539559 HPGDSO60760 199 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 WEE1P30291 646 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 GNG2P59768 71 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 PCDH1Q08174 1060 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 SYPL1Q16563 259 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 PODNL1Q6PEZ8 512 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 WASH2PQ6VEQ5 465 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 FAM181AQ8N9Y4 354 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 OR5D16Q8NGK9 328 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 B3GAT2Q9NPZ5 323 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 MAPRE3Q9UPY8 281 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 MGAT4BQ9UQ53 548 aa19.22■□□□□ 0.67
TMEM260-203ENST00000539559 LTBP2Q14767 1821 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 A0A1W2PRU2 124 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 NEDD8-MDP1E9PL57 170 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 ALPPP05187 535 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 OR12D1P0DN82 309 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 UQCRC2P22695 453 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 PPM1AP35813 382 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 MANFP55145 182 aaKnown RBP19.21■□□□□ 0.67
TMEM260-203ENST00000539559 FABP5Q01469 135 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 UBE3AQ05086 875 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 HENMT1Q5T8I9 393 aaKnown RBP19.21■□□□□ 0.67
TMEM260-203ENST00000539559 ADGRF3Q8IZF5 1079 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 ZBED6CLQ96FA7 236 aaPredicted RBP19.21■□□□□ 0.67
TMEM260-203ENST00000539559 DHRS1Q96LJ7 313 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 FOPNLQ96NB1 174 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 PLA2G12AQ9BZM1 189 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 KCNK12Q9HB15 430 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 ARRDC5A6NEK1 342 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 IL1AP01583 271 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 ACRP10323 421 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 POLR2EP19388 210 aaKnown RBP19.21■□□□□ 0.67
TMEM260-203ENST00000539559 MMP11P24347 488 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 DBPQ10586 325 aaPredicted RBP19.21■□□□□ 0.67
TMEM260-203ENST00000539559 MAP4K2Q12851 820 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 PLET1Q6UQ28 207 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 B3GLCTQ6Y288 498 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 TECPR1Q7Z6L1 1165 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 ZER1Q7Z7L7 766 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 LAPTM4BQ86VI4 370 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 IQCHQ86VS3 1027 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 SNAPC3Q92966 411 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 KCTD7Q96MP8 289 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 ZNF582Q96NG8 517 aaPredicted RBP19.21■□□□□ 0.67
TMEM260-203ENST00000539559 EGLN3Q9H6Z9 239 aa19.21■□□□□ 0.67
TMEM260-203ENST00000539559 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.21■□□□□ 0.67
TMEM260-203ENST00000539559 A0A0G2JN53 185 aa19.2■□□□□ 0.66
TMEM260-203ENST00000539559 RAB36O95755 333 aa19.2■□□□□ 0.66
TMEM260-203ENST00000539559 OLFM2O95897 454 aa19.2■□□□□ 0.66
TMEM260-203ENST00000539559 EPHX1P07099 455 aa19.2■□□□□ 0.66
TMEM260-203ENST00000539559 IFI30P13284 250 aa19.2■□□□□ 0.66
TMEM260-203ENST00000539559 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
TMEM260-203ENST00000539559 SLC9A3P48764 834 aa19.2■□□□□ 0.66
TMEM260-203ENST00000539559 GPR19Q15760 415 aa19.2■□□□□ 0.66
TMEM260-203ENST00000539559 SPDYE7PQ495Y7 208 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms