RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 HYAL2Q12891 473 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 CAMK1Q14012 370 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 ARHGEF6Q15052 776 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 PUS10Q3MIT2 529 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 C9orf64Q5T6V5 341 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 RAET1GQ6H3X3 334 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 DEF8Q6ZN54 512 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 UCN3Q969E3 161 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 PRR14Q9BWN1 585 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 ZNF717Q9BY31 904 aaPredicted RBP11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 EPHX3Q9H6B9 360 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 TMEM38AQ9H6F2 299 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 CXorf36Q9H7Y0 433 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 CLN6Q9NWW5 311 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 LOC102723532A0A0G2JNH3 316 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 TRBC2A0A5B9 178 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 FFAR1O14842 300 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 TLX2O43763 284 aaPredicted RBP11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 OR10H3O60404 316 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 B4GALT2O60909 372 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 ALX3O95076 343 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 CSF3P09919 207 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 DDX6P26196 483 aaKnown RBP eCLIP11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 UQCRC1P31930 480 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 TIE1P35590 1138 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 OPRD1P41143 372 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 PNLIPRP1P54315 467 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 PCBP3P57721 371 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 CDK6Q00534 326 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 PUM1Q14671 1186 aaKnown RBP eCLIP11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 P2RY14Q15391 338 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 SPHARQ15513 63 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 IFI44LQ53G44 452 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 ARHGAP15Q53QZ3 475 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 PLAG1Q6DJT9 500 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 TYW3Q6IPR3 259 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 GHDCQ8N2G8 530 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 SUN5Q8TC36 379 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 CXorf40BQ96DE9 158 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 COQ7Q99807 217 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 UCK2Q9BZX2 261 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 MYNNQ9NPC7 610 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 TM7SF3Q9NS93 570 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 UCKL1Q9NWZ5 548 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 SLC23A2Q9UGH3 650 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 SNX7Q9UNH6 387 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 GPR52Q9Y2T5 361 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 DYRK1BQ9Y463 629 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 HSPB11Q9Y547 144 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 ALPK3Q96L96 1907 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 GSAPA4D1B5 854 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 B4DXG7 233 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 CD72P21854 359 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 XCR1P46094 333 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 RORCP51449 518 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 GNG2P59768 71 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 RAB8AP61006 207 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 FCHO2Q0JRZ9 810 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 BTBD16Q32M84 506 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 RNASE12Q5GAN4 147 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 USP30Q70CQ3 517 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 ENKURQ8TC29 256 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 POF1BQ8WVV4 589 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 GATAD2BQ8WXI9 593 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 TMCO6Q96DC7 493 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 NUS1Q96E22 293 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 MTERF3Q96E29 417 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 LRIG1Q96JA1 1093 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 SNX18Q96RF0 628 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 EFCAB11Q9BUY7 163 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 SRRQ9GZT4 340 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 CRNNQ9UBG3 495 aaPredicted RBP11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 KIAA1549LQ6ZVL6 1849 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 A0A1W2PQ72 361 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 A0A1W2PRB8 838 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 NME6O75414 186 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 PSMA1P25786 263 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 CD79BP40259 229 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 GPR1P46091 355 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 EFR3AQ14156 821 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 LRRC32Q14392 662 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 SEC23BQ15437 767 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 CRB2Q5IJ48 1285 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 ATAT1Q5SQI0 421 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 FRMPD2BQ6IN97 320 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 FAM129CQ86XR2 697 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 ANKRD53Q8N9V6 530 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 HCAR2Q8TDS4 363 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 REPS1Q96D71 796 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 PAWRQ96IZ0 340 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 RACGAP1Q9H0H5 632 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 OR52A5Q9H2C5 316 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 MIXL1Q9H2W2 232 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 CDCP1Q9H5V8 836 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 ANKHQ9HCJ1 492 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 THSD1Q9NS62 852 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 NDRG2Q9UN36 371 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 POFUT2Q9Y2G5 429 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 SPIN1Q9Y657 262 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 EYSQ5T1H1 3165 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms