RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CCPG1Q9ULG6 757 aa2.97□□□□□ -1.93
CCDC7-209ENST00000539197 CA5BQ9Y2D0 317 aa2.97□□□□□ -1.93
CCDC7-209ENST00000539197 CHD4Q14839 1912 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 CCSO14618 274 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 GSTA2P09210 222 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 MFAP2P55001 183 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 FKBP1BP68106 108 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 ACKR1Q16570 336 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 MSANTD1Q6ZTZ1 278 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 GVQW1Q8N7I0 195 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 ICA1LQ8NDH6 482 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 CHDHQ8NE62 594 aaPredicted RBP2.96□□□□□ -1.94
CCDC7-209ENST00000539197 OR4F5Q8NH21 305 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 DEPDC1BQ8WUY9 529 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 CRYGNQ8WXF5 182 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 CCDC114Q96M63 670 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 THUMPD3Q9BV44 507 aaKnown RBP2.96□□□□□ -1.94
CCDC7-209ENST00000539197 WWP1Q9H0M0 922 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 TMEM161AQ9NX61 479 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 SLCO1C1Q9NYB5 712 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 VPS18Q9P253 973 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 ITM2BQ9Y287 266 aa2.96□□□□□ -1.94
CCDC7-209ENST00000539197 IGLV3-16A0A075B6K0 115 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 TRABD2BA6NFA1 517 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 HSPA4LO95757 839 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 SCG2P13521 617 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 EZRP15311 586 aaKnown RBP2.95□□□□□ -1.94
CCDC7-209ENST00000539197 RPS2P15880 293 aaKnown RBP2.95□□□□□ -1.94
CCDC7-209ENST00000539197 CASTP20810 708 aaKnown RBP2.95□□□□□ -1.94
CCDC7-209ENST00000539197 UNC50Q53HI1 259 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 SLC22A10Q63ZE4 541 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 VSIG1Q86XK7 387 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 ZNF561Q8N587 486 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 PNPLA2Q96AD5 504 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 LRRC2Q9BYS8 371 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 SLC25A39Q9BZJ4 359 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-209ENST00000539197 SEC14L4Q9UDX3 406 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 GIMAP2Q9UG22 337 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 ARMCX3Q9UH62 379 aaPredicted RBP2.95□□□□□ -1.94
CCDC7-209ENST00000539197 GPR132Q9UNW8 380 aa2.95□□□□□ -1.94
CCDC7-209ENST00000539197 SLC30A4O14863 429 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 ST8SIA3O43173 380 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 KIAA0513O60268 411 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 CSDE1O75534 798 aaKnown RBP2.94□□□□□ -1.94
CCDC7-209ENST00000539197 CRCPO75575 148 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 SERF1AO75920 110 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 SLU7O95391 586 aaKnown RBP2.94□□□□□ -1.94
CCDC7-209ENST00000539197 HSP90AB1P08238 724 aaKnown RBP2.94□□□□□ -1.94
CCDC7-209ENST00000539197 MMP10P09238 476 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 PSG2P11465 335 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 IFNAR1P17181 557 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 PSMB1P20618 241 aaKnown RBP2.94□□□□□ -1.94
CCDC7-209ENST00000539197 MTIF2P46199 727 aaKnown RBP2.94□□□□□ -1.94
CCDC7-209ENST00000539197 DCAF12Q5T6F0 453 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 Q7L0L9 218 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 NHLRC2Q8NBF2 726 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 UXS1Q8NBZ7 420 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 IL22RA2Q969J5 263 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 MRPL24Q96A35 216 aaKnown RBP2.94□□□□□ -1.94
CCDC7-209ENST00000539197 PCED1BQ96HM7 432 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 RNF41Q9H4P4 317 aaPredicted RBP2.94□□□□□ -1.94
CCDC7-209ENST00000539197 PATZ1Q9HBE1 687 aaKnown RBP2.94□□□□□ -1.94
CCDC7-209ENST00000539197 ADGRL4Q9HBW9 690 aa2.94□□□□□ -1.94
CCDC7-209ENST00000539197 APOBEC3BQ9UH17 382 aaKnown RBP2.94□□□□□ -1.94
CCDC7-209ENST00000539197 ERVV-1B6SEH8 477 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 PSMA7O14818 248 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 C8orf89P0DMQ9 161 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 ZNF33BQ06732 778 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 ACER2Q5QJU3 275 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 LRRC38Q5VT99 294 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 SNRNP48Q6IEG0 339 aaKnown RBP2.93□□□□□ -1.94
CCDC7-209ENST00000539197 DCLRE1AQ6PJP8 1040 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 FAM47EQ6ZV65 393 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 WDR49Q8IV35 697 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 LINC01555Q8NAE3 123 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 CCDC197Q8NCU1 140 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 SRSF12Q8WXF0 261 aaKnown RBP2.93□□□□□ -1.94
CCDC7-209ENST00000539197 CORO2AQ92828 525 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 RAB40CQ96S21 281 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 TBX15Q96SF7 602 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 PARK7Q99497 189 aaKnown RBP2.93□□□□□ -1.94
CCDC7-209ENST00000539197 ST6GALNAC5Q9BVH7 336 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 CXXC4Q9H2H0 198 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 PLEK2Q9NYT0 353 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 RAI14Q9P0K7 980 aa2.93□□□□□ -1.94
CCDC7-209ENST00000539197 IGLV8-61A0A075B6I0 122 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 A0A1W2PQ67 120 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 OOEPA6NGQ2 149 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 STBD1O95210 358 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 GOT2P00505 430 aaKnown RBP2.92□□□□□ -1.94
CCDC7-209ENST00000539197 PPOXP50336 477 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 RBP5P82980 135 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 IL17AQ16552 155 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 SGCBQ16585 318 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 PAGE2BQ5JRK9 111 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 CAPN13Q6MZZ7 669 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-209ENST00000539197 SIGLEC15Q6ZMC9 328 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 OTOAQ7RTW8 1153 aa2.92□□□□□ -1.94
CCDC7-209ENST00000539197 ERI1Q8IV48 349 aaKnown RBP2.92□□□□□ -1.94
CCDC7-209ENST00000539197 ZNF433Q8N7K0 673 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms