RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PSD3Q9NYI0 1048 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 B4GALT7Q9UBV7 327 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 L3MBTL1Q9Y468 752 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 PCDHGB3Q9Y5G1 929 aa11.5□□□□□ -0.57
VAMP1-206ENST00000538970 A0A096LPK6 155 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 A0A1W2PS29 197 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 FOXE1O00358 373 aaPredicted RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 TRIM3O75382 744 aaPredicted RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 ZWINTO95229 277 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 SIX3O95343 332 aaPredicted RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 ALDOAP04075 364 aaKnown RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 SLC35E2P0CK97 266 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 SSTR4P31391 388 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 SERPINB8P50452 374 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 NEK2P51955 445 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 RPS6KA2Q15349 733 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 TECRLQ5HYJ1 363 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 TBCELQ5QJ74 424 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 METTL2BQ6P1Q9 378 aaKnown RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 SEM1Q6ZVN7 128 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 WDR53Q7Z5U6 358 aaPredicted RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 ULK2Q8IYT8 1036 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 TAGAPQ8N103 731 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 UCN3Q969E3 161 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 MRRFQ96E11 262 aaKnown RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 ZNF597Q96LX8 424 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 JSRP1Q96MG2 331 aaPredicted RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 TEX10Q9NXF1 929 aaPredicted RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 ALKBH4Q9NXW9 302 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 CPSF2Q9P2I0 782 aaKnown RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 RNF11Q9Y3C5 154 aa11.49□□□□□ -0.57
VAMP1-206ENST00000538970 TNPO3Q9Y5L0 923 aaKnown RBP11.49□□□□□ -0.57
VAMP1-206ENST00000538970 C2orf92A0A1B0GVN3 265 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 ESYT3A0FGR9 886 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 ANKRD33BA6NCL7 494 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 OR7A17O14581 309 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 PGRMC2O15173 223 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 SEMA3DO95025 777 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 CLDN9O95484 217 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 GBAP04062 536 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 CD1EP15812 388 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 GDF1P27539 372 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 DNAJA1P31689 397 aaKnown RBP11.48□□□□□ -0.57
VAMP1-206ENST00000538970 TRPC1P48995 793 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 ART1P52961 327 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 KLC3Q6P597 504 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 TMEM64Q6YI46 380 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 ZNF572Q7Z3I7 529 aaPredicted RBP11.48□□□□□ -0.57
VAMP1-206ENST00000538970 GALNT12Q8IXK2 581 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 LIX1Q8N485 282 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 OR52B6Q8NGF0 335 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 NRGNQ92686 78 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 DIO2Q92813 273 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 TP53INP1Q96A56 240 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 CDK15Q96Q40 435 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 SERPINI1Q99574 410 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 TMUB1Q9BVT8 246 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 NOL11Q9H8H0 719 aaKnown RBP11.48□□□□□ -0.57
VAMP1-206ENST00000538970 CXorf21Q9HAI6 301 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 ZDHHC18Q9NUE0 388 aa11.48□□□□□ -0.57
VAMP1-206ENST00000538970 DNAJC13O75165 2243 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 C15orf38-AP3S2A0A0A6YYH1 394 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 HSPB2A8KAH6 182 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 TP53I11O14683 189 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 CT62P0C5K7 136 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 TYK2P29597 1187 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 CASQ1P31415 396 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 FBXW4P57775 412 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 CRYZQ08257 329 aaKnown RBP11.47□□□□□ -0.57
VAMP1-206ENST00000538970 FUT7Q11130 342 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 DUSP8Q13202 625 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 HSPB2Q16082 182 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 UAP1Q16222 522 aaPredicted RBP11.47□□□□□ -0.57
VAMP1-206ENST00000538970 ACSF3Q4G176 576 aaPredicted RBP11.47□□□□□ -0.57
VAMP1-206ENST00000538970 UBAP2Q5T6F2 1119 aaKnown RBP11.47□□□□□ -0.57
VAMP1-206ENST00000538970 TMEM198Q66K66 360 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 BICRALQ6AI39 1079 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 ARSKQ6UWY0 536 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 ZZZ3Q8IYH5 903 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 PLD6Q8N2A8 252 aaKnown RBP11.47□□□□□ -0.57
VAMP1-206ENST00000538970 ZNF615Q8N8J6 731 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 PTGR2Q8N8N7 351 aaPredicted RBP11.47□□□□□ -0.57
VAMP1-206ENST00000538970 RELL2Q8NC24 303 aaPredicted RBP11.47□□□□□ -0.57
VAMP1-206ENST00000538970 NAXEQ8NCW5 288 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 SPPL2AQ8TCT8 520 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 ANP32BQ92688 251 aaKnown RBP11.47□□□□□ -0.57
VAMP1-206ENST00000538970 RILPQ96NA2 401 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 SECISBP2Q96T21 854 aaKnown RBP11.47□□□□□ -0.57
VAMP1-206ENST00000538970 VPS11Q9H270 941 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 UBQLN3Q9H347 655 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 ACSS3Q9H6R3 686 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 PCTPQ9UKL6 214 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 IKBKGQ9Y6K9 419 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 INTS1Q8N201 2190 aaKnown RBP11.47□□□□□ -0.57
VAMP1-206ENST00000538970 EML6Q6ZMW3 1958 aa11.47□□□□□ -0.57
VAMP1-206ENST00000538970 CAPN14A8MX76 684 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 KDM4EB2RXH2 506 aaPredicted RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 CTAG2O75638 210 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 SNX4O95219 450 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 HPNP05981 417 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms