RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 BMP10O95393 424 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 IFNA16P05015 189 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 PORP16435 677 aaPredicted RBP13.26□□□□□ -0.29
CD4-208ENST00000538827 MPIP34949 423 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 MC3RP41968 323 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 FRKP42685 505 aaPredicted RBP13.26□□□□□ -0.29
CD4-208ENST00000538827 HSD17B7P56937 341 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 FOXL2P58012 376 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 GABREP78334 506 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 SELPLGQ14242 412 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 RABL3Q5HYI8 236 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 LCN10Q6JVE6 187 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 SCUBE1Q8IWY4 988 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 MSRB3Q8IXL7 192 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 GALNT15Q8N3T1 639 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 RNF148Q8N7C7 305 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 LSM14AQ8ND56 463 aaKnown RBP13.26□□□□□ -0.29
CD4-208ENST00000538827 ADCY4Q8NFM4 1077 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 SUN3Q8TAQ9 357 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 STT3BQ8TCJ2 826 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 DOK4Q8TEW6 326 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 KAT2AQ92830 837 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 TSLPQ969D9 159 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 FKBP10Q96AY3 582 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 CLPTM1LQ96KA5 538 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 ZNF681Q96N22 645 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 PTCHD1Q96NR3 888 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 ANKRD27Q96NW4 1050 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 RAB3IPQ96QF0 476 aaPredicted RBP13.26□□□□□ -0.29
CD4-208ENST00000538827 CDRT15Q96T59 188 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 HOPXQ9BPY8 73 aaPredicted RBP13.26□□□□□ -0.29
CD4-208ENST00000538827 CHST8Q9H2A9 424 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 NECTIN3Q9NQS3 549 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 FOXJ2Q9P0K8 574 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 DKK4Q9UBT3 224 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 MKL2Q9ULH7 1088 aa13.26□□□□□ -0.29
CD4-208ENST00000538827 PRPF19Q9UMS4 504 aaKnown RBP13.26□□□□□ -0.29
CD4-208ENST00000538827 CCDC88CQ9P219 2028 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 TRBV5-3A0A0A0MS03 114 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 C9orf172C9J069 976 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 TGFBR3LH3BV60 316 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 GSC2O15499 205 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 NPPAP01160 153 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 HEXBP07686 556 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 ZGLP1P0C6A0 271 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 NQO1P15559 274 aaKnown RBP13.25□□□□□ -0.29
CD4-208ENST00000538827 HOXB9P17482 250 aaPredicted RBP13.25□□□□□ -0.29
CD4-208ENST00000538827 IL10P22301 178 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 TP53BP2Q13625 1128 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 MLC1Q15049 377 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 RUNDC3AQ59EK9 446 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 FAAH2Q6GMR7 532 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 NANOGP8Q6NSW7 305 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 C8orf82Q6P1X6 216 aaPredicted RBP13.25□□□□□ -0.29
CD4-208ENST00000538827 FAM199XQ6PEV8 388 aaPredicted RBP13.25□□□□□ -0.29
CD4-208ENST00000538827 C6orf15Q6UXA7 325 aaPredicted RBP13.25□□□□□ -0.29
CD4-208ENST00000538827 QSOX2Q6ZRP7 698 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 ZNF605Q86T29 641 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 OR8J3Q8NGG0 315 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 ADAMTS14Q8WXS8 1223 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 TMEM125Q96AQ2 219 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 PPWD1Q96BP3 646 aaKnown RBP13.25□□□□□ -0.29
CD4-208ENST00000538827 CCDC124Q96CT7 223 aaKnown RBP13.25□□□□□ -0.29
CD4-208ENST00000538827 SLC35G5Q96KT7 338 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 LRFN5Q96NI6 719 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 GPATCH1Q9BRR8 931 aaKnown RBP13.25□□□□□ -0.29
CD4-208ENST00000538827 THUMPD3Q9BV44 507 aaKnown RBP13.25□□□□□ -0.29
CD4-208ENST00000538827 ALOXE3Q9BYJ1 711 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 NANOGQ9H9S0 305 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 SIRT3Q9NTG7 399 aaPredicted RBP13.25□□□□□ -0.29
CD4-208ENST00000538827 CMTM6Q9NX76 183 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 RAXQ9Y2V3 346 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 SDK2Q58EX2 2172 aa13.25□□□□□ -0.29
CD4-208ENST00000538827 CFAP73A6NFT4 308 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 CYSRT1A8MQ03 144 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 A8MUA0 341 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 EVPLLA8MZ36 301 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 CLIC1O00299 241 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 NME4O00746 187 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 CIB2O75838 187 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 DLGAP3O95886 979 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 ZCCHC18P0CG32 403 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 PLA2G2AP14555 144 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 TNNI3P19429 210 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 UQCRC2P22695 453 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 SLC6A2P23975 617 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 PTPN6P29350 595 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 PRKAG1P54619 331 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 MRPS35P82673 323 aaKnown RBP13.24□□□□□ -0.29
CD4-208ENST00000538827 RHAGQ02094 409 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 SERTAD2Q14140 314 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 CEBPEQ15744 281 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 FAM198BQ6UWH4 519 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 OVCH1Q7RTY7 1134 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 ULK2Q8IYT8 1036 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 GOT1L1Q8NHS2 421 aaPredicted RBP13.24□□□□□ -0.29
CD4-208ENST00000538827 SFXN5Q8TD22 340 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 SLC39A7Q92504 469 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 DPH2Q9BQC3 489 aaPredicted RBP13.24□□□□□ -0.29
CD4-208ENST00000538827 PELOQ9BRX2 385 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms