RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 ERV3-1Q14264 604 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 PRSS53Q2L4Q9 553 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 SPRED3Q2MJR0 410 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 ZNF385BQ569K4 471 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 PAGE3Q5JUK9 113 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 C6orf10Q5SRN2 563 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 DCAF12Q5T6F0 453 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 ARHGAP40Q5TG30 622 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 ANXA8L1Q5VT79 327 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 CDCP2Q5VXM1 449 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 AP1ARQ63HQ0 302 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 PRMT9Q6P2P2 845 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 C16orf89Q6UX73 402 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 CEACAM20Q6UY09 585 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 YTHDF3Q7Z739 585 aaKnown RBP4.88□□□□□ -1.63
LINC02408-202ENST00000538573 ANKRD46Q86W74 232 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 OR4N5Q8IXE1 308 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 CLECL1Q8IZS7 167 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 SHISA5Q8N114 240 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 ARL6IP6Q8N6S5 226 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 BMPERQ8N8U9 685 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 PCYOX1LQ8NBM8 494 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 OR4K14Q8NGD5 310 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 OR8J2Q8NGG1 315 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 OR51Q1Q8NH59 317 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 FBXO27Q8NI29 283 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.88□□□□□ -1.63
LINC02408-202ENST00000538573 CIDECQ96AQ7 238 aaPredicted RBP4.88□□□□□ -1.63
LINC02408-202ENST00000538573 ROPN1LQ96C74 230 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 KLHL29Q96CT2 875 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 MVB12AQ96EY5 273 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 PEX11GQ96HA9 241 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 ITCHQ96J02 903 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 PANX1Q96RD7 426 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 BBS4Q96RK4 519 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 CSF3RQ99062 836 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 BTBD10Q9BSF8 475 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 RBCK1Q9BYM8 510 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 BHLHE41Q9C0J9 482 aaPredicted RBP4.88□□□□□ -1.63
LINC02408-202ENST00000538573 PIF1Q9H611 641 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 CLK4Q9HAZ1 481 aaKnown RBP4.88□□□□□ -1.63
LINC02408-202ENST00000538573 SLC35C2Q9NQQ7 365 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 FBXO8Q9NRD0 319 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 GIMAP4Q9NUV9 329 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 GID8Q9NWU2 228 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 FAM120CQ9NX05 1096 aaKnown RBP4.88□□□□□ -1.63
LINC02408-202ENST00000538573 QPCTLQ9NXS2 382 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 TAS2R1Q9NYW7 299 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 EHD3Q9NZN3 535 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 C6orf203Q9P0P8 240 aaPredicted RBP4.88□□□□□ -1.63
LINC02408-202ENST00000538573 TRPC4Q9UBN4 977 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 PISDQ9UG56 409 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 CROTQ9UKG9 612 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 UTS2RQ9UKP6 389 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 PCDHGB4Q9UN71 923 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 LOXL2Q9Y4K0 774 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 TMEM184BQ9Y519 407 aaPredicted RBP4.88□□□□□ -1.63
LINC02408-202ENST00000538573 N6AMT1Q9Y5N5 214 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 ZNF780BQ9Y6R6 833 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 LAMA1P25391 3075 aa4.88□□□□□ -1.63
LINC02408-202ENST00000538573 MUC6Q6W4X9 2439 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 CCDC187A0A096LP49 1063 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 PMS2P1A4D2B8 440 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 FAM149AA5PLN7 773 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 B4E171 279 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 ANKRD65E5RJM6 399 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 RNASET2O00584 256 aaKnown RBP4.87□□□□□ -1.63
LINC02408-202ENST00000538573 CYR61O00622 381 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 RFXANKO14593 260 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 SLC30A4O14863 429 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 PLD2O14939 933 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 NVLO15381 856 aaKnown RBP4.87□□□□□ -1.63
LINC02408-202ENST00000538573 PDPK1O15530 556 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 TBX19O60806 448 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 CPNE3O75131 537 aaKnown RBP4.87□□□□□ -1.63
LINC02408-202ENST00000538573 JRKO75564 520 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 CDC123O75794 336 aaPredicted RBP4.87□□□□□ -1.63
LINC02408-202ENST00000538573 KCNK5O95279 499 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 C6orf47O95873 294 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 NPPAP01160 153 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 PDGFAP04085 211 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 F13BP05160 661 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 GSNP06396 782 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 KLK3P07288 261 aaPredicted RBP4.87□□□□□ -1.63
LINC02408-202ENST00000538573 FHP07954 510 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 ZNF28P17035 718 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 CSNK2A2P19784 350 aaPredicted RBP4.87□□□□□ -1.63
LINC02408-202ENST00000538573 ITGAXP20702 1163 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 AGXTP21549 392 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 NTSP30990 170 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 MPIP34949 423 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 FEN1P39748 380 aaKnown RBP4.87□□□□□ -1.63
LINC02408-202ENST00000538573 ETV5P41161 510 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 TSPAN7P41732 249 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 XCR1P46094 333 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 XKP51811 444 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 NCBP2P52298 156 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC02408-202ENST00000538573 HNRNPFP52597 415 aaKnown RBP4.87□□□□□ -1.63
LINC02408-202ENST00000538573 WNT3P56703 355 aa4.87□□□□□ -1.63
LINC02408-202ENST00000538573 BTG2P78543 158 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms