RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 SBSNQ6UWP8 590 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 ENPP6Q6UWR7 440 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 ANGPTL8Q6UXH0 198 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 ZNF793Q6ZN11 406 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 ZNF704Q6ZNC4 412 aaPredicted RBP10.12□□□□□ -0.79
CLPB-208ENST00000538021 SLCO4C1Q6ZQN7 724 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 P4HA3Q7Z4N8 544 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 VN1R5Q7Z5H4 357 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 OR1J4Q8NGS1 313 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 PGM2Q96G03 612 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 TMEM41AQ96HV5 264 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 MARK4Q96L34 752 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 KCNC2Q96PR1 638 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 KRT12Q99456 494 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 SLC39A3Q9BRY0 314 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 AMBRA1Q9C0C7 1298 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 OPN3Q9H1Y3 402 aaPredicted RBP10.12□□□□□ -0.79
CLPB-208ENST00000538021 IKZF3Q9UKT9 509 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 LAMP3Q9UQV4 416 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 CR1P17927 2039 aa10.12□□□□□ -0.79
CLPB-208ENST00000538021 C2orf92A0A1B0GVN3 265 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 SH3BGRLO75368 114 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 TGM6O95932 706 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 PLAUP00749 431 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 ALOX15P16050 662 aaPredicted RBP10.11□□□□□ -0.79
CLPB-208ENST00000538021 CHMP24386 653 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 ATP5A1P25705 553 aaKnown RBP10.11□□□□□ -0.79
CLPB-208ENST00000538021 GABRB3P28472 473 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 CCKARP32238 428 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 IDUAP35475 653 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 CASP3P42574 277 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 STARP49675 285 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 RPP38P78345 283 aaKnown RBP10.11□□□□□ -0.79
CLPB-208ENST00000538021 IGLV3-21P80748 117 aaPredicted RBP10.11□□□□□ -0.79
CLPB-208ENST00000538021 OCRLQ01968 901 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 RUNX1T1Q06455 604 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 PCDH1Q08174 1060 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 SETDB1Q15047 1291 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 C18orf21Q32NC0 220 aaPredicted RBP10.11□□□□□ -0.79
CLPB-208ENST00000538021 DRICH1Q6PGQ1 229 aaPredicted RBP10.11□□□□□ -0.79
CLPB-208ENST00000538021 ADGRE4PQ86SQ3 457 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 TRIM42Q8IWZ5 723 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 ACOT4Q8N9L9 421 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 C2CD4AQ8NCU7 369 aaPredicted RBP10.11□□□□□ -0.79
CLPB-208ENST00000538021 OR14L1PQ8NHC6 308 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 RDH11Q8TC12 318 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 STARD4Q96DR4 205 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 UCN2Q96RP3 112 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 ROGDIQ9GZN7 287 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 PSD3Q9NYI0 1048 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 CLCF1Q9UBD9 225 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 FETUBQ9UGM5 382 aa10.11□□□□□ -0.79
CLPB-208ENST00000538021 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.1□□□□□ -0.79
CLPB-208ENST00000538021 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 PLOD2O00469 737 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 CLGNO14967 610 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 OR10H2O60403 315 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 TMCC2O75069 709 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 MLNP12872 115 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 KRT15P19012 456 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 TMED10P49755 219 aaKnown RBP10.1□□□□□ -0.79
CLPB-208ENST00000538021 SLC37A1P57057 533 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 RPS4XP62701 263 aaKnown RBP10.1□□□□□ -0.79
CLPB-208ENST00000538021 SIRPAP78324 504 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 SRSF2Q01130 221 aaKnown RBP10.1□□□□□ -0.79
CLPB-208ENST00000538021 KIF5AQ12840 1032 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 ETFDHQ16134 617 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 PPP1R3AQ16821 1122 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 BEX5Q5H9J7 111 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 HLA-DQA1Q5Y7H0 255 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 RAD9BQ6WBX8 426 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 C22orf34Q6ZV56 151 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 SH2D5Q6ZV89 423 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 UBE3DQ7Z6J8 389 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 PRR22Q8IZ63 422 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 ZNF611Q8N823 705 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 BBOF1Q8ND07 529 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 SRFBP1Q8NEF9 429 aaKnown RBP10.1□□□□□ -0.79
CLPB-208ENST00000538021 RIT1Q92963 219 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 TRMT61AQ96FX7 289 aaKnown RBP10.1□□□□□ -0.79
CLPB-208ENST00000538021 SERPINB12Q96P63 405 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 TBCDQ9BTW9 1192 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 G6PC3Q9BUM1 346 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 KLHL4Q9C0H6 718 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 RPF2Q9H7B2 306 aaKnown RBP10.1□□□□□ -0.79
CLPB-208ENST00000538021 NT5DC2Q9H857 520 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 METTL7AQ9H8H3 244 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 SERHLQ9NQF3 203 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 SNX15Q9NRS6 342 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 RYDENQ9NUL5 291 aaKnown RBP10.1□□□□□ -0.79
CLPB-208ENST00000538021 ELOVL5Q9NYP7 299 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 CDC42EP3Q9UKI2 254 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 CAPN6Q9Y6Q1 641 aa10.1□□□□□ -0.79
CLPB-208ENST00000538021 NPEPPSL1A6NEC2 478 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 OR6C76A6NM76 312 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 SAP18O00422 153 aaKnown RBP10.09□□□□□ -0.79
CLPB-208ENST00000538021 PRKRAO75569 313 aaKnown RBP10.09□□□□□ -0.79
CLPB-208ENST00000538021 AHSGP02765 367 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 HIST1H1TP22492 207 aaPredicted RBP10.09□□□□□ -0.79
CLPB-208ENST00000538021 ACVR1BP36896 505 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms