RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 FAIM2Q9BWQ8 316 aa15.9■□□□□ 0.14
SFSWAP-205ENST00000537164 WWTR1Q9GZV5 400 aa15.9■□□□□ 0.14
SFSWAP-205ENST00000537164 SH2D2AQ9NP31 389 aa15.9■□□□□ 0.14
SFSWAP-205ENST00000537164 PLEKHB1Q9UF11 243 aaPredicted RBP15.9■□□□□ 0.14
SFSWAP-205ENST00000537164 PSME2Q9UL46 239 aa15.9■□□□□ 0.14
SFSWAP-205ENST00000537164 EXPH5Q8NEV8 1989 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 GOLGA6L10A6NI86 522 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 NPIPA5E9PKD4 350 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 NPIPB8E9PQR5 432 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 SLC19A2O60779 497 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 CT62P0C5K7 136 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 DRD2P14416 443 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 HMGCS1Q01581 520 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 ACSM2AQ08AH3 577 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 MGAT2Q10469 447 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 MAP4K2Q12851 820 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 ERCC6LQ2NKX8 1250 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 PRICKLE4Q2TBC4 344 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 CFAP157Q5JU67 520 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 C1QL3Q5VWW1 255 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 ACSM2BQ68CK6 577 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 RNF165Q6ZSG1 346 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 MMP21Q8N119 569 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 GHDCQ8N2G8 530 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 C17orf47Q8NEP4 570 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 OR7G1Q8NGA0 311 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 SLC22A8Q8TCC7 542 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 TP53INP1Q96A56 240 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 CTHRC1Q96CG8 243 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 APIPQ96GX9 242 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 METTL2AQ96IZ6 378 aaKnown RBP15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 ZNF681Q96N22 645 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 TRMOQ9BU70 441 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 TSPAN10Q9H1Z9 355 aaPredicted RBP15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 TNFRSF12AQ9NP84 129 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 PLSCR2Q9NRY7 297 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 ZNF639Q9UID6 485 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 RAB21Q9UL25 225 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 NPIPA1Q9UND3 350 aa15.89■□□□□ 0.13
SFSWAP-205ENST00000537164 ITPR2Q14571 2701 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 NCOA6Q14686 2063 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 PCDH7O60245 1069 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 TRIM13O60858 407 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 FBXO45P0C2W1 286 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 UROSP10746 265 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 CSNK2A2P19784 350 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 CNR1P21554 472 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 SSTR4P31391 388 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 TIA1P31483 386 aaKnown RBP eCLIP15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 SOX18P35713 384 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 GPR85P60893 370 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 IFFO1Q0D2I5 559 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 CEBPEQ15744 281 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 ZNF750Q32MQ0 723 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 RGS9BPQ6ZS82 235 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 FJX1Q86VR8 437 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 SPPL2CQ8IUH8 684 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 C10orf107Q8IVU9 208 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 HOMEZQ8IX15 550 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 CCDC63Q8NA47 563 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 OR2M7Q8NG81 312 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 FAM76AQ8TAV0 307 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 PAQR8Q8TEZ7 354 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 SPACA9Q96E40 222 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 CNRIP1Q96F85 164 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 PARD6BQ9BYG5 372 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 SHCBP1LQ9BZQ2 653 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 OR10A5Q9H207 317 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 HEY2Q9UBP5 337 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 DLGAP4Q9Y2H0 992 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 CCL27Q9Y4X3 112 aa15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 V9GYY5 206 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-205ENST00000537164 ZNF407Q9C0G0 2248 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 C2orf92A0A1B0GVN3 265 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 RSL1D1O76021 490 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 GLSO94925 669 aaPredicted RBP15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 CLDN1O95832 211 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 PRPH2P23942 346 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 DEKP35659 375 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 HEPACAMQ14CZ8 416 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 HYAL4Q2M3T9 481 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 CMPK2Q5EBM0 449 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 MAMDC2Q7Z304 686 aaPredicted RBP15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 SRRM1Q8IYB3 904 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 DOK4Q8TEW6 326 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 C16orf78Q8WTQ4 265 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 SREK1Q8WXA9 508 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 ADIPOR1Q96A54 375 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 KLHL29Q96CT2 875 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 FAM173AQ9BQD7 235 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 GATA5Q9BWX5 397 aaPredicted RBP15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 IQCGQ9H095 443 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 ZDHHC11Q9H8X9 412 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 SACM1LQ9NTJ5 587 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 MAT2BQ9NZL9 334 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 EHD3Q9NZN3 535 aa15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 WBP11Q9Y2W2 641 aaKnown RBP15.87■□□□□ 0.13
SFSWAP-205ENST00000537164 PCNX1Q96RV3 2341 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms