RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 NDUFV3P56181 108 aaKnown RBP4.49□□□□□ -1.69
PRKDC-208ENST00000536710 SRPXP78539 464 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 PRKCEQ02156 737 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 DPYSQ14117 519 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 EMC2Q15006 297 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 HKDC1Q2TB90 917 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 MUC21Q5SSG8 566 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 GFI1BQ5VTD9 330 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 SYVN1Q86TM6 617 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 PYROXD2Q8N2H3 581 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 FAM71CQ8NEG0 241 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 DQX1Q8TE96 717 aaKnown RBP4.49□□□□□ -1.69
PRKDC-208ENST00000536710 SELENOMQ8WWX9 145 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 C18orf12Q96KH6 178 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 LINC00479Q96M42 142 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 PRICKLE1Q96MT3 831 aaPredicted RBP4.49□□□□□ -1.69
PRKDC-208ENST00000536710 ACCSQ96QU6 501 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 IWS1Q96ST2 819 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 TRIM51Q9BSJ1 452 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 EGLN1Q9GZT9 426 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 PARLQ9H300 379 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 NT5DC2Q9H857 520 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 MOB1AQ9H8S9 216 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 ACTR8Q9H981 624 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 LIN28AQ9H9Z2 209 aaKnown RBP4.49□□□□□ -1.69
PRKDC-208ENST00000536710 POLE3Q9NRF9 147 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 TAS2R16Q9NYV7 291 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 THYN1Q9P016 225 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 ANKMY1Q9P2S6 941 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 THAP10Q9P2Z0 257 aaPredicted RBP4.49□□□□□ -1.69
PRKDC-208ENST00000536710 MIOXQ9UGB7 285 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 MGAT4AQ9UM21 535 aa4.49□□□□□ -1.69
PRKDC-208ENST00000536710 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.49□□□□□ -1.69
PRKDC-208ENST00000536710 TRBV5-4A0A0C4DH59 114 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 ARHGEF33A8MVX0 844 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 POP4O95707 220 aaKnown RBP4.48□□□□□ -1.69
PRKDC-208ENST00000536710 OR9G9P0C7N8 305 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 CYP11B1P15538 503 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 DPEP1P16444 411 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 TRIM23P36406 574 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 CAPGP40121 348 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 RAG2P55895 527 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 HILS1P60008 231 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 GSTO1P78417 241 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 ZNF528Q3MIS6 628 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 TEX35Q5T0J7 233 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 DPY19L2P2Q6ZN68 376 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 GPR142Q7Z601 462 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 LUZP1Q86V48 1076 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 GPBP1Q86WP2 473 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 FAM131BQ86XD5 332 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 RNF130Q86XS8 419 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 ZBTB44Q8NCP5 570 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 C11orf52Q96A22 123 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 PNPLA2Q96AD5 504 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 SLC45A3Q96JT2 553 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 ASIC3Q9UHC3 531 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 MUTYHQ9UIF7 546 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 FKBP7Q9Y680 259 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 AP1M2Q9Y6Q5 423 aa4.48□□□□□ -1.69
PRKDC-208ENST00000536710 ABCC4O15439 1325 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 ZMYM6O95789 1325 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 A8MXK9 166 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 SNAP91O60641 907 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 SMPD2O60906 423 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 GUCA1CO95843 209 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 RIDAP52758 137 aaKnown RBP4.47□□□□□ -1.69
PRKDC-208ENST00000536710 NOP14P78316 857 aaKnown RBP4.47□□□□□ -1.69
PRKDC-208ENST00000536710 NFATC2Q13469 925 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 ENPP2Q13822 863 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 HAGHQ16775 308 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 SHROOM1Q2M3G4 852 aaPredicted RBP4.47□□□□□ -1.69
PRKDC-208ENST00000536710 UNC50Q53HI1 259 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 C2CD6Q53TS8 623 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 ZC2HC1BQ5TFG8 222 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 AGAP7PQ5VUJ5 663 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 GOLGA7Q7Z5G4 137 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 AMZ2Q86W34 360 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 CARM1Q86X55 608 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 CATSPER3Q86XQ3 398 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 MISPQ8IVT2 679 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 CENPSQ8N2Z9 138 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 ZNF781Q8N8C0 355 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 SAMD12Q8N8I0 201 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 MINDY2Q8NBR6 621 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 OR52B4Q8NGK2 314 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 OR4F5Q8NH21 305 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 CHPT1Q8WUD6 406 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 GTF3AQ92664 365 aaKnown RBP4.47□□□□□ -1.69
PRKDC-208ENST00000536710 NABP1Q96AH0 204 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 NAF1Q96HR8 494 aaKnown RBP4.47□□□□□ -1.69
PRKDC-208ENST00000536710 NDUFAF3Q9BU61 184 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 ELL3Q9HB65 397 aaPredicted RBP4.47□□□□□ -1.69
PRKDC-208ENST00000536710 VAT1LQ9HCJ6 419 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 TUBGCP4Q9UGJ1 667 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 IKZF3Q9UKT9 509 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 ZNF490Q9ULM2 529 aaPredicted RBP4.47□□□□□ -1.69
PRKDC-208ENST00000536710 MGAT4BQ9UQ53 548 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 KLHDC2Q9Y2U9 406 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms