RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 OR5L2Q8NGL0 311 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 OR2T11Q8NH01 316 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 DNAJB8Q8NHS0 232 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 NUBPLQ8TB37 319 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 ASB15Q8WXK1 588 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 TMEM125Q96AQ2 219 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 KLHL29Q96CT2 875 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 CNRIP1Q96F85 164 aaPredicted RBP12.18□□□□□ -0.46
PRKDC-206ENST00000536429 ZNF681Q96N22 645 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 GAL3ST4Q96RP7 486 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 WWTR1Q9GZV5 400 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 TUBB1Q9H4B7 451 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 HPF1Q9NWY4 346 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 ERVK-11Q9UQG0 969 aa12.18□□□□□ -0.46
PRKDC-206ENST00000536429 POLR3HQ9Y535 204 aaPredicted RBP12.18□□□□□ -0.46
PRKDC-206ENST00000536429 GNG14A0A1W2PPG7 69 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 CCDC151A5D8V7 595 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 NPIPA5E9PKD4 350 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 CDK2AP1O14519 115 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 AZIN1O14977 448 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 RGS16O15492 202 aaPredicted RBP12.17□□□□□ -0.46
PRKDC-206ENST00000536429 DYRK3O43781 588 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 PEX1O43933 1283 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 GUCY1B2O75343 617 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 PORP16435 677 aaPredicted RBP12.17□□□□□ -0.46
PRKDC-206ENST00000536429 DEKP35659 375 aaKnown RBP12.17□□□□□ -0.46
PRKDC-206ENST00000536429 MEOX1P50221 254 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 NR0B1P51843 470 aaKnown RBP12.17□□□□□ -0.46
PRKDC-206ENST00000536429 NAA20P61599 178 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 FUT7Q11130 342 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 IMPG1Q17R60 797 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 MPEG1Q2M385 716 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 PRICKLE4Q2TBC4 344 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 TNFAIP8L3Q5GJ75 292 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 ARL13AQ5H913 290 aaPredicted RBP12.17□□□□□ -0.46
PRKDC-206ENST00000536429 CEP85LQ5SZL2 805 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 KANK2Q63ZY3 851 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 GFRALQ6UXV0 394 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 TMEM64Q6YI46 380 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 RNF111Q6ZNA4 994 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 ZNF615Q8N8J6 731 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 ZNF441Q8N8Z8 693 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 PSD4Q8NDX1 1056 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 C7orf57Q8NEG2 295 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 PKNOX2Q96KN3 472 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 ART5Q96L15 291 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 FAIM2Q9BWQ8 316 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 SIRT5Q9NXA8 310 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 MAT2BQ9NZL9 334 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 SEC14L3Q9UDX4 400 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 UTS2RQ9UKP6 389 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 NPIPA1Q9UND3 350 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 DTX4Q9Y2E6 619 aa12.17□□□□□ -0.46
PRKDC-206ENST00000536429 DOPEY1Q5JWR5 2465 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 H3BQF6 201 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 NPHS1O60500 1241 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 NME6O75414 186 aaPredicted RBP12.16□□□□□ -0.46
PRKDC-206ENST00000536429 RSL1D1O76021 490 aaKnown RBP12.16□□□□□ -0.46
PRKDC-206ENST00000536429 BPGMP07738 259 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 ANXA4P09525 319 aaPredicted RBP12.16□□□□□ -0.46
PRKDC-206ENST00000536429 CCL3P10147 92 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 PCSK2P16519 638 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 TACR1P25103 407 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 HSF1Q00613 529 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 ALDH6A1Q02252 535 aaKnown RBP12.16□□□□□ -0.46
PRKDC-206ENST00000536429 MPP2Q14168 576 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 EXOSC7Q15024 291 aaKnown RBP12.16□□□□□ -0.46
PRKDC-206ENST00000536429 KIAA0040Q15053 153 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 UGT3A2Q3SY77 523 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 C1QL3Q5VWW1 255 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 Q6ZSR9 355 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 GPALPP1Q8IXQ4 340 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 OR6Y1Q8NGX8 325 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 CDC26Q8NHZ8 85 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.16□□□□□ -0.46
PRKDC-206ENST00000536429 AGR3Q8TD06 166 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 EXOSC8Q96B26 276 aaKnown RBP12.16□□□□□ -0.46
PRKDC-206ENST00000536429 GPR137Q96N19 417 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 PSMG3-AS1Q96PY0 264 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 TRMOQ9BU70 441 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 BRINP2Q9C0B6 783 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 OR10A5Q9H207 317 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 CENPHQ9H3R5 247 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 ANKRA2Q9H9E1 313 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 EXO1Q9UQ84 846 aaKnown RBP12.16□□□□□ -0.46
PRKDC-206ENST00000536429 KLF13Q9Y2Y9 288 aaPredicted RBP12.16□□□□□ -0.46
PRKDC-206ENST00000536429 DNAJC15Q9Y5T4 150 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 SPTBN1Q01082 2364 aaKnown RBP12.16□□□□□ -0.46
PRKDC-206ENST00000536429 ZGRF1Q86YA3 2104 aa12.16□□□□□ -0.46
PRKDC-206ENST00000536429 WDR91A4D1P6 747 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 GOLGA6L10A6NI86 522 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 OR6C76A6NM76 312 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 LRRTM2O43300 516 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 CBX7O95931 251 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 LDLRP01130 860 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 ATP1B1P05026 303 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 LINC00032P0C843 101 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 DRD2P14416 443 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 ZNF24P17028 368 aa12.15□□□□□ -0.46
PRKDC-206ENST00000536429 CSNK2A2P19784 350 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms