RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 HYAL4Q2M3T9 481 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 TEX35Q5T0J7 233 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 CCNYL2Q5T2Q4 361 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 XKRXQ6PP77 449 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 RGS9BPQ6ZS82 235 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 NCCRP1Q6ZVX7 275 aaPredicted RBP12.97□□□□□ -0.33
SF3B2-215ENST00000534307 MCEMP1Q8IX19 187 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 CDYL2Q8N8U2 506 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 OR4K14Q8NGD5 310 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 FAM57AQ8TBR7 257 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 PAQR8Q8TEZ7 354 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 PHF10Q8WUB8 498 aaKnown RBP12.97□□□□□ -0.33
SF3B2-215ENST00000534307 SELENOMQ8WWX9 145 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 SPACA9Q96E40 222 aaPredicted RBP12.97□□□□□ -0.33
SF3B2-215ENST00000534307 HBEGFQ99075 208 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 FAM173AQ9BQD7 235 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 RYDENQ9NUL5 291 aaKnown RBP12.97□□□□□ -0.33
SF3B2-215ENST00000534307 PCDHA9Q9Y5H5 950 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 HRH3Q9Y5N1 445 aa12.97□□□□□ -0.33
SF3B2-215ENST00000534307 ANKHD1Q8IWZ3 2542 aaKnown RBP12.96□□□□□ -0.33
SF3B2-215ENST00000534307 A0A1W2PPM1 405 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 FOXO6A8MYZ6 492 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 PRSS44E7EML9 344 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 E9PLN8 166 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 G3V2L1 256 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 MANBAO00462 879 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 PRRG2O14669 202 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 CT62P0C5K7 136 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 ESRRAP11474 423 aaPredicted RBP12.96□□□□□ -0.33
SF3B2-215ENST00000534307 HSD3B1P14060 373 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 S1PR1P21453 382 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 HSD3B2P26439 372 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 PIK3R1P27986 724 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 SSTR4P31391 388 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 PTGS2P35354 604 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 SOX18P35713 384 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 MAPK12P53778 367 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 PPIAP62937 165 aaKnown RBP12.96□□□□□ -0.33
SF3B2-215ENST00000534307 CSTF3Q12996 717 aaKnown RBP12.96□□□□□ -0.33
SF3B2-215ENST00000534307 LCP2Q13094 533 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 SP5Q6BEB4 398 aaPredicted RBP12.96□□□□□ -0.33
SF3B2-215ENST00000534307 SLC48A1Q6P1K1 146 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 ARHGAP11AQ6P4F7 1023 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 C3P1Q6ZMU1 363 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 RNF111Q6ZNA4 994 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 GK5Q6ZS86 529 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 GPRIN3Q6ZVF9 776 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 SLC22A9Q8IVM8 553 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 GALNT12Q8IXK2 581 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 MMP21Q8N119 569 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 SLC22A8Q8TCC7 542 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 CHTF18Q8WVB6 975 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 TM4SF18Q96CE8 201 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 VKORC1Q9BQB6 163 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 GSTO2Q9H4Y5 243 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 IL1RL2Q9HB29 575 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 PROK2Q9HC23 129 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 SACM1LQ9NTJ5 587 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 TBK1Q9UHD2 729 aa12.96□□□□□ -0.33
SF3B2-215ENST00000534307 CHCHD2Q9Y6H1 151 aaPredicted RBP12.96□□□□□ -0.33
SF3B2-215ENST00000534307 DNAJC13O75165 2243 aa12.96□□□□□ -0.34
SF3B2-215ENST00000534307 CACNA1CQ13936 2221 aa12.96□□□□□ -0.34
SF3B2-215ENST00000534307 EXPH5Q8NEV8 1989 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 C1orf226A1L170 272 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 FAM166BA8MTA8 275 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 ACOT7O00154 380 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 CDC40O60508 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
SF3B2-215ENST00000534307 PDE9AO76083 593 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 IGHG3P01860 377 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 KRT6AP02538 564 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 KRT6BP04259 564 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 P04436 131 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 CPMP14384 443 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 CHN1P15882 459 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 KRT6CP48668 564 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 DNASE1L1P49184 302 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 HTR6P50406 440 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 XKP51811 444 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 MGAT2Q10469 447 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 NTRK2Q16620 822 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 ZNF630Q2M218 657 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-215ENST00000534307 EMC4Q5J8M3 183 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 FAM47EQ6ZV65 393 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 SLC29A4Q7RTT9 530 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 CD163Q86VB7 1156 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 SLC22A16Q86VW1 577 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 TDRPQ86YL5 185 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 DND1Q8IYX4 353 aaKnown RBP12.95□□□□□ -0.34
SF3B2-215ENST00000534307 TMEM251Q8N6I4 163 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 C1orf52Q8N6N3 182 aaKnown RBP12.95□□□□□ -0.34
SF3B2-215ENST00000534307 OR10G3Q8NGC4 313 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 TP53INP1Q96A56 240 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 C11orf24Q96F05 449 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-215ENST00000534307 GAL3ST4Q96RP7 486 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 ACPTQ9BZG2 426 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 DEFB127Q9H1M4 99 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 TUBA8Q9NY65 449 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-215ENST00000534307 VPS29Q9UBQ0 182 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 DCDC2Q9UHG0 476 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms