RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 CDK15Q96Q40 435 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CD180Q99467 661 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ALX4Q9H161 411 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 ABCB9Q9NP78 766 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 KLK14Q9P0G3 267 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 KPTNQ9Y664 436 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ANXA2P2A6NMY6 339 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ZAR1LA6NP61 321 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 GTPBP1O00178 669 aaKnown RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 NPC1O15118 1278 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 RLN1P04808 185 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ANXA2P07355 339 aaKnown RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 MMP3P08254 477 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 S100PP25815 95 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CD96P40200 585 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CBX5P45973 191 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 MAP2K4P45985 399 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 KCNC1P48547 511 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CNIH2Q6PI25 160 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 C5orf46Q6UWT4 87 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 C3P1Q6ZMU1 363 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 TPGS1Q6ZTW0 290 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 BTN2A1Q7KYR7 527 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 NANOGP1Q8N7R0 232 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 OR7G2Q8NG99 324 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 STOML3Q8TAV4 291 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 SLC25A46Q96AG3 418 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 RAB7BQ96AH8 199 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 LRR1Q96L50 414 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CENPOQ9BU64 300 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 PBDC1Q9BVG4 233 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ZNF416Q9BWM5 594 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CORINQ9Y5Q5 1042 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 NOX1Q9Y5S8 564 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 HEBP2Q9Y5Z4 205 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 RREB1Q92766 1687 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 TRBV5-4A0A0C4DH59 114 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 GXYLT2A0PJZ3 443 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 AGAP14A8MT82 685 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 EMC8O43402 210 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 MITFO75030 526 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 ZNF780AO75290 641 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 IFNA21P01568 189 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 HLA-DQB1P01920 261 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 APOC3P02656 99 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ATP1B1P05026 303 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ADH6P28332 368 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 TAS2R41P59536 307 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 MAXP61244 160 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CD83Q01151 205 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 OPCMLQ14982 345 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ACTBL2Q562R1 376 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 PRSS42Q7Z5A4 293 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 RBM23Q86U06 439 aaKnown RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 SKA3Q8IX90 412 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 REM2Q8IYK8 340 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 CPXM2Q8N436 756 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 XAGE5Q8WWM1 108 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 SLC5A11Q8WWX8 675 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 EDAQ92838 391 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 PTERQ96BW5 349 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 POM121Q96HA1 1249 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 SECISBP2Q96T21 854 aaKnown RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 P2RY13Q9BPV8 354 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CCM2Q9BSQ5 444 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 MFFQ9GZY8 342 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 C11orf54Q9H0W9 315 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 SUV39H2Q9H5I1 410 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 IFT22Q9H7X7 185 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 SLAMF7Q9NQ25 335 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 MARCH4Q9P2E8 410 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 TMEFF2Q9UIK5 374 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 CLCA3PQ9Y6N3 262 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CACNA1FO60840 1977 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CASZ1Q86V15 1759 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 A0A1B0GVC2 190 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 ADAM12O43184 909 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 DBIP07108 87 aaKnown RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 ATXN8OSP0DMR3 200 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 PRKACAP17612 351 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 LAG3P18627 525 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 TSPAN8P19075 237 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 HK1P19367 917 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 AGXTP21549 392 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CBLP22681 906 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 NFYAP23511 347 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 GTF2E2P29084 291 aaKnown RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 CNR2P34972 360 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 KCNJ5P48544 419 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 MASP1P48740 699 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 SLC9A5Q14940 896 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 TIGD5Q53EQ6 642 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 UBXN11Q5T124 520 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 PRAMEF13Q5VWM6 474 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 CCSAPQ6IQ19 270 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 NDUFAF7Q7L592 441 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 C3orf30Q96M34 536 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 UBL7Q96S82 380 aaPredicted RBP3.86□□□□□ -1.79
SOX6-217ENST00000533870 ARPC5LQ9BPX5 153 aa3.86□□□□□ -1.79
SOX6-217ENST00000533870 PIF1Q9H611 641 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms