RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 ZDHHC6Q9H6R6 413 aa1.97□□□□□ -2.09
BRCA2-205ENST00000533776 ELL3Q9HB65 397 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-205ENST00000533776 SLC25A19Q9HC21 320 aa1.97□□□□□ -2.09
BRCA2-205ENST00000533776 GDF3Q9NR23 364 aa1.97□□□□□ -2.09
BRCA2-205ENST00000533776 MIS18AQ9NYP9 233 aa1.97□□□□□ -2.09
BRCA2-205ENST00000533776 TECRQ9NZ01 308 aaKnown RBP1.97□□□□□ -2.09
BRCA2-205ENST00000533776 LEF1Q9UJU2 399 aaPredicted RBP1.97□□□□□ -2.09
BRCA2-205ENST00000533776 KCNK6Q9Y257 313 aa1.97□□□□□ -2.09
BRCA2-205ENST00000533776 WI2-2373I1.2A0A1W2PRP0 233 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 A0A1W2PRQ8 180 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 SMIM30A4D0T7 59 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 ZSCAN5CA6NGD5 496 aaPredicted RBP1.96□□□□□ -2.1
BRCA2-205ENST00000533776 SLC15A5A6NIM6 579 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 RNF212BA8MTL3 300 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 SAP18O00422 153 aaKnown RBP1.96□□□□□ -2.1
BRCA2-205ENST00000533776 E2F3O00716 465 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 TNFSF11O14788 317 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 PSMD3O43242 534 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 PROS1P07225 676 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 PPP2R1BP30154 601 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 CTNNB1P35222 781 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 SERPINH1P50454 418 aaKnown RBP1.96□□□□□ -2.1
BRCA2-205ENST00000533776 SMSP52788 366 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 UCNP55089 124 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 RCN2Q14257 317 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 C17orf58Q2M2W7 97 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 ANKRD55Q3KP44 614 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 C14orf28Q4W4Y0 310 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 UNC50Q53HI1 259 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 ZNF789Q5FWF6 425 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 KCTD11Q693B1 232 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 CGB2Q6NT52 195 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 IGFL2Q6UWQ7 119 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 ZNF600Q6ZNG1 722 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 ITIH5Q86UX2 942 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 ZNF525Q8N782 197 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 BEST4Q8NFU0 473 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 OR4L1Q8NH43 312 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 GOLGA5Q8TBA6 731 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 TBCKQ8TEA7 893 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 ZBED6CLQ96FA7 236 aaPredicted RBP1.96□□□□□ -2.1
BRCA2-205ENST00000533776 DDX50Q9BQ39 737 aaKnown RBP1.96□□□□□ -2.1
BRCA2-205ENST00000533776 DESI2Q9BSY9 194 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 ZBP1Q9H171 429 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 MMADHCQ9H3L0 296 aaPredicted RBP1.96□□□□□ -2.1
BRCA2-205ENST00000533776 RNF41Q9H4P4 317 aaPredicted RBP1.96□□□□□ -2.1
BRCA2-205ENST00000533776 SEC14L4Q9UDX3 406 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 TEKT2Q9UIF3 430 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 MRTO4Q9UKD2 239 aaKnown RBP1.96□□□□□ -2.1
BRCA2-205ENST00000533776 RNF24Q9Y225 148 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 PLEKHA6Q9Y2H5 1048 aa1.96□□□□□ -2.1
BRCA2-205ENST00000533776 ZFP37Q9Y6Q3 630 aaPredicted RBP1.96□□□□□ -2.1
BRCA2-205ENST00000533776 CFAP65Q6ZU64 1925 aaKnown RBP1.95□□□□□ -2.1
BRCA2-205ENST00000533776 ARID1AO14497 2285 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 CCT8L1PA6NM43 557 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 MEI4A8MW99 385 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 ZNF263O14978 683 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 UROSP10746 265 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 MBL2P11226 248 aaPredicted RBP1.95□□□□□ -2.1
BRCA2-205ENST00000533776 P4HA1P13674 534 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 VCLP18206 1134 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 TKTL1P51854 596 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 NME5P56597 212 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 SLMAPQ14BN4 828 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 TRADDQ15628 312 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 STX1AQ16623 288 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 IFI44LQ53G44 452 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 C1orf189Q5VU69 101 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 FAM219BQ5XKK7 198 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 FBXW8Q8N3Y1 598 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 NKAIN3Q8N8D7 197 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 FBXO25Q8TCJ0 367 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 U2AF1L4Q8WU68 220 aaKnown RBP1.95□□□□□ -2.1
BRCA2-205ENST00000533776 ZNF799Q96GE5 643 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 FUT8Q9BYC5 575 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 OSBPL8Q9BZF1 889 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 ADGRL4Q9HBW9 690 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.95□□□□□ -2.1
BRCA2-205ENST00000533776 PLSCR3Q9NRY6 295 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 ABCC13Q9NSE7 274 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 SPG21Q9NZD8 308 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 LIPT1Q9Y234 373 aa1.95□□□□□ -2.1
BRCA2-205ENST00000533776 KIF7Q2M1P5 1343 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 CACNB4O00305 520 aaPredicted RBP1.94□□□□□ -2.1
BRCA2-205ENST00000533776 TXNDC12O95881 172 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 PDGFBP01127 241 aaPredicted RBP1.94□□□□□ -2.1
BRCA2-205ENST00000533776 CT45A8P0DMV1 189 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 CT45A9P0DMV2 189 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 STIP1P31948 543 aaKnown RBP1.94□□□□□ -2.1
BRCA2-205ENST00000533776 GEMP55040 296 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 STX1BP61266 288 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 HSPA14Q0VDF9 509 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 GK2Q14410 553 aaPredicted RBP1.94□□□□□ -2.1
BRCA2-205ENST00000533776 KRT31Q15323 416 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 STXBP2Q15833 593 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 CT45A2Q5DJT8 189 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 GLRA4Q5JXX5 417 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 ACER2Q5QJU3 275 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 DDI2Q5TDH0 399 aa1.94□□□□□ -2.1
BRCA2-205ENST00000533776 RTL6Q6ICC9 239 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms