RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 METTL4Q8N3J2 472 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 C1orf52Q8N6N3 182 aaKnown RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 CCNYL1Q8N7R7 359 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 GOLM1Q8NBJ4 401 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 OR4K14Q8NGD5 310 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 FAM57AQ8TBR7 257 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 SDCCAG3Q96C92 435 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 KLHL29Q96CT2 875 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 SPACA9Q96E40 222 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 JSRP1Q96MG2 331 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 BRINP2Q9C0B6 783 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 EXO5Q9H790 373 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 PFDN4Q9NQP4 134 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 NMRK1Q9NWW6 199 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 TUBA8Q9NY65 449 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 ADAM29Q9UKF5 820 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 KLF2Q9Y5W3 355 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 LIPGQ9Y5X9 500 aa9.64□□□□□ -0.87
CAPN1-225ENST00000533704 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.64□□□□□ -0.87
CAPN1-225ENST00000533704 MYO9AB2RTY4 2548 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 C2orf92A0A1B0GVN3 265 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 A0A1W2PPM1 405 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 E9PLN8 166 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 CT62P0C5K7 136 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 CPMP14384 443 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 COX6B1P14854 86 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 CHN1P15882 459 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 KRT15P19012 456 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 FEN1P39748 380 aaKnown RBP9.63□□□□□ -0.87
CAPN1-225ENST00000533704 SLC37A1P57057 533 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 BTKQ06187 659 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 GALNT1Q10472 559 aaPredicted RBP9.63□□□□□ -0.87
CAPN1-225ENST00000533704 EBPQ15125 230 aaKnown RBP9.63□□□□□ -0.87
CAPN1-225ENST00000533704 CDSNQ15517 529 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 ZNF791Q3KP31 576 aaPredicted RBP9.63□□□□□ -0.87
CAPN1-225ENST00000533704 FAM180BQ6P0A1 224 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 ARHGAP11AQ6P4F7 1023 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 SCIMPQ6UWF3 145 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 RGS9BPQ6ZS82 235 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 SLC22A9Q8IVM8 553 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 PRR22Q8IZ63 422 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 TAGAPQ8N103 731 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 FAM109AQ8N4B1 249 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 TMEM251Q8N6I4 163 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 MYRIPQ8NFW9 859 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 OR10G3Q8NGC4 313 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 OR5M9Q8NGP3 310 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 METTL6Q8TCB7 284 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 SMC6Q96SB8 1091 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 ZNF382Q96SR6 550 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 VKORC1Q9BQB6 163 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 C1QTNF3Q9BXJ4 246 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 TXLNGYQ9BZA5 131 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 EPB41L4BQ9H329 900 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 LDAHQ9H6V9 325 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 RUBCNLQ9H714 662 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 CXorf21Q9HAI6 301 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 BRF2Q9HAW0 419 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 IL1RL2Q9HB29 575 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 TNFRSF10DQ9UBN6 386 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 BCAP29Q9UHQ4 241 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 ZNF225Q9UK10 706 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 PCDHA9Q9Y5H5 950 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 HCFC1P51610 2035 aa9.63□□□□□ -0.87
CAPN1-225ENST00000533704 GNG14A0A1W2PPG7 69 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 C1orf226A1L170 272 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 GOLGA6L10A6NI86 522 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 OR6C76A6NM76 312 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 ADAM10O14672 748 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 ULK1O75385 1050 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 CLDN14O95500 239 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 CLPSP04118 112 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 SHBGP04278 402 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 GSTA1P08263 222 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 CELA3AP09093 270 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 MYL2P10916 166 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 PRF1P14222 555 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 PORP16435 677 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-225ENST00000533704 IMPDH1P20839 514 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 SERPINB3P29508 390 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 GALNSP34059 522 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 HTR6P50406 440 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 PRKAA2P54646 552 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 TBL3Q12788 808 aaKnown RBP9.62□□□□□ -0.87
CAPN1-225ENST00000533704 LCP2Q13094 533 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 EXOSC7Q15024 291 aaKnown RBP9.62□□□□□ -0.87
CAPN1-225ENST00000533704 NNATQ16517 81 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 ZNF630Q2M218 657 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-225ENST00000533704 ZNF585AQ6P3V2 769 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 FAM111BQ6SJ93 734 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 LYPD8Q6UX82 237 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 LCA5Q86VQ0 697 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 MCEMP1Q8IX19 187 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 SLC15A4Q8N697 577 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 CCDC63Q8NA47 563 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 ADCY4Q8NFM4 1077 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 CDC26Q8NHZ8 85 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 ACMSDQ8TDX5 336 aa9.62□□□□□ -0.87
CAPN1-225ENST00000533704 PHF10Q8WUB8 498 aaKnown RBP9.62□□□□□ -0.87
CAPN1-225ENST00000533704 DIO2Q92813 273 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms