RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 CELSR2Q9HCU4 2923 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 KCNE1BA0A087WTH5 132 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 TRBV5-3A0A0A0MS03 114 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 C2orf74A8MZ97 194 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 BTN3A3O00478 584 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 SGTAO43765 313 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 TRMUO75648 421 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 STK16O75716 305 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 PRSS23O95084 383 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 CDH1P12830 882 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 PTPN6P29350 595 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 CAPGP40121 348 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 DCDP81605 110 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 ZNF169Q14929 603 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 SF1Q15637 639 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 KCTD21Q4G0X4 260 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 ADNP2Q6IQ32 1131 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 MRPL14Q6P1L8 145 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 TMEM179BQ7Z7N9 219 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 LILRA3Q8N6C8 439 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 OR2T12Q8NG77 320 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 HM13Q8TCT9 377 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 FAR1Q8WVX9 515 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 GFM2Q969S9 779 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 NACC2Q96BF6 587 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 PPP3R2Q96LZ3 170 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 MUS81Q96NY9 551 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 TSSK3Q96PN8 268 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 FERD3LQ96RJ6 166 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 THUMPD3Q9BV44 507 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 NAA50Q9GZZ1 169 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 CHRNA10Q9GZZ6 450 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 MUC13Q9H3R2 512 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 SMURF2Q9HAU4 748 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 LRTM1Q9HBL6 345 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 ARL15Q9NXU5 204 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 IFT80Q9P2H3 777 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 FAM8A1Q9UBU6 413 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 RSL24D1Q9UHA3 163 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 PCDHB14Q9Y5E9 798 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 ZGRF1Q86YA3 2104 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 DIDO1Q9BTC0 2240 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 CENPEQ02224 2701 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 IGLV3-16A0A075B6K0 115 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 H3BMH7 237 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 RGS14O43566 566 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 CNOT3O75175 753 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 OR2B3O76000 313 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 LRATO95237 230 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 KCNH1O95259 989 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 BMP10O95393 424 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 NPPAP01160 153 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 ALPLP05186 524 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 UMODP07911 640 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 PVRP15151 417 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 EPB42P16452 691 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 HOXB9P17482 250 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 CD22P20273 847 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 AOAHP28039 575 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 PIGAP37287 484 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 NSG1P42857 185 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 ARSFP54793 590 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 PMS2P3Q13401 168 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 BOP1Q14137 746 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 MAPKAPK3Q16644 382 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 GPR33Q49SQ1 333 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 PRAMEF13Q5VWM6 474 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 RPUSD3Q6P087 351 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 GDF7Q7Z4P5 450 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 GALNT10Q86SR1 603 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 DHRSXQ8N5I4 330 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 OR8J3Q8NGG0 315 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 APIPQ96GX9 242 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 LURAP1Q96LR2 239 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 COPS8Q99627 209 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 NPLQ9BXD5 320 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 DPY30Q9C005 99 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 PAIP1Q9H074 479 aaKnown RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 MVB12BQ9H7P6 319 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 ZDHHC3Q9NYG2 299 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 ACTR10Q9NZ32 417 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 GPRC5BQ9NZH0 403 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-207ENST00000533242 TRPS1Q9UHF7 1281 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 MAGEL2Q9UJ55 1249 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 CSAG2Q9Y5P2 127 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 LRBAP50851 2863 aa7.75□□□□□ -1.17
NEDD8-207ENST00000533242 POLEQ07864 2286 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 MASP2O00187 686 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 PRKD3O94806 890 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 UMPSP11172 480 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 FCGR1AP12314 374 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 SDC1P18827 310 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 PRKACGP22612 351 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 GABRA4P48169 554 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 CDK9P50750 372 aaKnown RBP7.74□□□□□ -1.17
NEDD8-207ENST00000533242 GZMMP51124 257 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 TUBA4AP68366 448 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 GBX1Q14549 363 aa7.74□□□□□ -1.17
NEDD8-207ENST00000533242 RBBP5Q15291 538 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms