RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 ZNF730Q6ZMV8 503 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 CDH24Q86UP0 819 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 TOR1AIP2Q8NFQ8 470 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 ZNF431Q8TF32 576 aaPredicted RBP14.12□□□□□ -0.15
NXF1-213ENST00000532297 GEMIN6Q8WXD5 167 aaKnown RBP14.12□□□□□ -0.15
NXF1-213ENST00000532297 SLC6A18Q96N87 628 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 LYSMD1Q96S90 227 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 SORBS1Q9BX66 1292 aaKnown RBP14.12□□□□□ -0.15
NXF1-213ENST00000532297 SGK2Q9HBY8 427 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 MRPL17Q9NRX2 175 aaKnown RBP14.12□□□□□ -0.15
NXF1-213ENST00000532297 GPATCH2Q9NW75 528 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 GNG14A0A1W2PPG7 69 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 SLC16A8O95907 504 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 SOX9P48436 509 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 HMGA2P52926 109 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 EPHB3P54753 998 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 UBE3AQ05086 875 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 PRSS53Q2L4Q9 553 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 UAP1L1Q3KQV9 507 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 ATAT1Q5SQI0 421 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 KCTD20Q7Z5Y7 419 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 FCRL1Q96LA6 429 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 GPR137Q96N19 417 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 AIFM2Q9BRQ8 373 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 BTNL2Q9UIR0 455 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 EXO1Q9UQ84 846 aaKnown RBP14.12□□□□□ -0.15
NXF1-213ENST00000532297 COL4A6Q14031 1691 aa14.12□□□□□ -0.15
NXF1-213ENST00000532297 A8MUA0 341 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 H3BN98 237 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 PSIP1O75475 530 aaKnown RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 SOD2P04179 222 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 ANXA4P09525 319 aaPredicted RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 RPS13P62277 151 aaKnown RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 SNRPD1P62314 119 aaKnown RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 POU4F3Q15319 338 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 ZNF284Q2VY69 593 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 CRTC2Q53ET0 693 aaPredicted RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 ZNF57Q68EA5 555 aaPredicted RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 CASP12Q6UXS9 341 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 TMPRSS11BQ86T26 416 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 TCEANCQ8N8B7 351 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 WDR20Q8TBZ3 569 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 TMEM169Q96HH4 297 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 TMEM43Q9BTV4 400 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 RIOK2Q9BVS4 552 aaKnown RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 SPNS1Q9H2V7 528 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 MGAT4AQ9UM21 535 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 ING4Q9UNL4 249 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 RUVBL1Q9Y265 456 aaKnown RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 AUP1Q9Y679 476 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 RANBP2P49792 3224 aaKnown RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 CPEP16870 476 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 CCR2P41597 374 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 GSTM5P46439 218 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 AP1S2P56377 157 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 RPS25P62851 125 aaKnown RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 SF3A2Q15428 464 aaKnown RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 GCNT6Q5T4J0 391 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 TMEM65Q6PI78 240 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.11□□□□□ -0.15
NXF1-213ENST00000532297 WACQ9BTA9 647 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 ZNF224Q9NZL3 707 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 A0A0C4DFX4 3053 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 TRIM77I1YAP6 450 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 GFYI3L273 518 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 LEFTY2O00292 366 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 MPC1LP0DKB6 136 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 DEFB103AP81534 67 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 MFSD13AQ14CX5 517 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 LAPTM4BQ86VI4 370 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 DTX3Q8N9I9 347 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 GALNT11Q8NCW6 608 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 HUS1BQ8NHY5 278 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 PCNPQ8WW12 178 aaKnown RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 PKP4Q99569 1192 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 TM9SF2Q99805 663 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 ZNF282Q9UDV7 671 aaPredicted RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 LSM7Q9UK45 103 aaKnown RBP14.11□□□□□ -0.15
NXF1-213ENST00000532297 CDH10Q9Y6N8 788 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 ENPP4Q9Y6X5 453 aa14.11□□□□□ -0.15
NXF1-213ENST00000532297 DENND4CQ5VZ89 1909 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 IGLV3-16A0A075B6K0 115 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 C6orf47O95873 294 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 OSMP13725 252 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 ETV5P41161 510 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 ETV1P50549 477 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 MVDP53602 400 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 RBBP4Q09028 425 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 SP140Q13342 867 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 SUZ12Q15022 739 aaKnown RBP14.1□□□□□ -0.15
NXF1-213ENST00000532297 KLHL22Q53GT1 634 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 TMEM201Q5SNT2 666 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 LIPJQ5W064 366 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 ZNF770Q6IQ21 691 aaPredicted RBP14.1□□□□□ -0.15
NXF1-213ENST00000532297 AGTRAPQ6RW13 159 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 WDR48Q8TAF3 677 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 ECHDC3Q96DC8 303 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 TCEAL4Q96EI5 215 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 MED18Q9BUE0 208 aa14.1□□□□□ -0.15
NXF1-213ENST00000532297 SLC28A3Q9HAS3 691 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms