RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 DND1Q8IYX4 353 aaKnown RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 GCNT2Q8N0V5 402 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 TCAIMQ8N3R3 496 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 RNF175Q8N4F7 328 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 TRIM58Q8NG06 486 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 OR1J4Q8NGS1 313 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 GRK7Q8WTQ7 553 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 TANKQ92844 425 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 PTCD3Q96EY7 689 aaKnown RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 ZC3HAV1LQ96H79 300 aaKnown RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 FBXL20Q96IG2 436 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 COX4I2Q96KJ9 171 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 FAM111AQ96PZ2 611 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 NAT9Q9BTE0 207 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 EFCAB11Q9BUY7 163 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 PITHD1Q9GZP4 211 aaPredicted RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 WWTR1Q9GZV5 400 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 PRDM14Q9GZV8 571 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 CNOT10Q9H9A5 744 aaKnown RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 CALHM2Q9HA72 323 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 KLHL28Q9NXS3 571 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 GPRC5BQ9NZH0 403 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 TRPS1Q9UHF7 1281 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 CORO1CQ9ULV4 474 aaPredicted RBP8.44□□□□□ -1.06
NEDD8-206ENST00000531430 NPFFR2Q9Y5X5 522 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 MED12Q93074 2177 aa8.44□□□□□ -1.06
NEDD8-206ENST00000531430 MBD3L4A6NDZ8 208 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-206ENST00000531430 MBD3L3A6NE82 208 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-206ENST00000531430 MBD3L5A6NJ08 208 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-206ENST00000531430 RNF212BA8MTL3 300 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 PRAMEF4O60810 478 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 GPR75O95800 540 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 IL18BPO95998 194 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 IGKV3-11P04433 115 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 FPR1P21462 350 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 SSTR4P31391 388 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 KCNJ5P48544 419 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 STARP49675 285 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 NRG3P56975 720 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 FAM27E3Q08E93 113 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 BIKQ13323 160 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 TGFBIQ15582 683 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 PDK4Q16654 411 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 TMEM35AQ53FP2 167 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 PRAMEF9Q5VWM5 478 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 MED27Q6P2C8 311 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 ANGPTL8Q6UXH0 198 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 CHMP1BQ7LBR1 199 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 ADAMTSL2Q86TH1 951 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 LRRC75A-AS1Q8N1F1 130 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 ZNF441Q8N8Z8 693 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 CNEP1R1Q8N9A8 125 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 BBOF1Q8ND07 529 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 OR14L1PQ8NHC6 308 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 MBD3L2Q8NHZ7 208 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-206ENST00000531430 SPPL2AQ8TCT8 520 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 ZNF473Q8WTR7 871 aaKnown RBP8.43□□□□□ -1.06
NEDD8-206ENST00000531430 SMPDL3BQ92485 455 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 UCN3Q969E3 161 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 RGMAQ96B86 450 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 CMTM7Q96FZ5 175 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 WFIKKN1Q96NZ8 548 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 TM9SF2Q99805 663 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 TUBA1CQ9BQE3 449 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 TMEM79Q9BSE2 394 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 MS4A8Q9BY19 250 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 METTL7AQ9H8H3 244 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 SNX15Q9NRS6 342 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 MS4A12Q9NXJ0 267 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 JKAMPQ9P055 326 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 ADAM21Q9UKJ8 722 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 MAPRE3Q9UPY8 281 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 C15orf41Q9Y2V0 281 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 PSAT1Q9Y617 370 aa8.43□□□□□ -1.06
NEDD8-206ENST00000531430 ANKRD33BA6NCL7 494 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 DNALI1O14645 258 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-206ENST00000531430 PIAS1O75925 651 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 RCBTB2O95199 551 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 GOSR1O95249 250 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 CNOT4O95628 575 aaKnown RBP8.42□□□□□ -1.06
NEDD8-206ENST00000531430 ACTL6AO96019 429 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 CCDC166P0CW27 439 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 CD22P20273 847 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 NT5EP21589 574 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 SOX18P35713 384 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 BUD31P41223 144 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-206ENST00000531430 CASP3P42574 277 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 NR1H2P55055 460 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 SLC37A1P57057 533 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 RPS13P62277 151 aaKnown RBP8.42□□□□□ -1.06
NEDD8-206ENST00000531430 MGAT5Q09328 741 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 EBPQ15125 230 aaKnown RBP8.42□□□□□ -1.06
NEDD8-206ENST00000531430 RPS6KA2Q15349 733 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 NNATQ16517 81 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 DEPDC1Q5TB30 811 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 C6orf163Q5TEZ5 329 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 KHDRBS2Q5VWX1 349 aaKnown RBP8.42□□□□□ -1.06
NEDD8-206ENST00000531430 ANKRD34AQ69YU3 496 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 TIGD3Q6B0B8 471 aa8.42□□□□□ -1.06
NEDD8-206ENST00000531430 DESI1Q6ICB0 168 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms