RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TMEM37Q8WXS4 190 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 GTF3AQ92664 365 aaKnown RBP3.8□□□□□ -1.8
C11orf88-204ENST00000529661 MRPL24Q96A35 216 aaKnown RBP3.8□□□□□ -1.8
C11orf88-204ENST00000529661 PNPLA2Q96AD5 504 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 FAM124BQ9H5Z6 455 aaPredicted RBP3.8□□□□□ -1.8
C11orf88-204ENST00000529661 ECT2Q9H8V3 914 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 PLEKHA3Q9HB20 300 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 POLE3Q9NRF9 147 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 LHX3Q9UBR4 397 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 ASIC3Q9UHC3 531 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 IL20RAQ9UHF4 553 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 PLA2G4CQ9UP65 541 aa3.8□□□□□ -1.8
C11orf88-204ENST00000529661 NOTCH3Q9UM47 2321 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 MEX3AA1L020 520 aaKnown RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 MEI4A8MW99 385 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 ADAM12O43184 909 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 DCXO43602 365 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 SMPD2O60906 423 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 RPS2P15880 293 aaKnown RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 AOC1P19801 751 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 PTPN4P29074 926 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 PKLRP30613 574 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 FCGR2BP31994 310 aaPredicted RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 FCGR2CP31995 323 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 TMEM50BP56557 158 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 SLC26A5P58743 744 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 POLR2FP61218 127 aaKnown RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 SNX1Q13596 522 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 KLF5Q13887 457 aaPredicted RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 SLC17A1Q14916 467 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 KNOP1Q1ED39 458 aaKnown RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 MOGAT2Q3SYC2 334 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 ANKDD1AQ495B1 522 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 AGKQ53H12 422 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 FASTKD1Q53R41 847 aaKnown RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 BSPRYQ5W0U4 402 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 GPR142Q7Z601 462 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 LINC00518Q8N0U6 118 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 ZNF606Q8WXB4 792 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 PHYHIPQ92561 330 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 NCLNQ969V3 563 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 TRIM44Q96DX7 344 aaPredicted RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 ATXN7L3BQ96GX2 97 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 RBM18Q96H35 190 aaKnown RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 COG3Q96JB2 828 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 NSMCE3Q96MG7 304 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 AGAP3Q96P47 875 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 AGAP4Q96P64 663 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 ACCSQ96QU6 501 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 NDUFAF3Q9BU61 184 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 RAB11FIP5Q9BXF6 653 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 FGFBP2Q9BYJ0 223 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 CCSER1Q9C0I3 900 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 NACA2Q9H009 215 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 PARLQ9H300 379 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 TMEM231Q9H6L2 316 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 KCNK13Q9HB14 408 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 NMUR1Q9HB89 426 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 TEX10Q9NXF1 929 aaPredicted RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 NDE1Q9NXR1 346 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 TUBGCP4Q9UGJ1 667 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 DUSP12Q9UNI6 340 aa3.79□□□□□ -1.8
C11orf88-204ENST00000529661 NIP7Q9Y221 180 aaKnown RBP eCLIP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 RRP15Q9Y3B9 282 aaKnown RBP3.79□□□□□ -1.8
C11orf88-204ENST00000529661 SYNRGQ9UMZ2 1314 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 TRBV5-4A0A0C4DH59 114 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 F8WDY8 70 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 MPHOSPH10O00566 681 aaKnown RBP3.78□□□□□ -1.8
C11orf88-204ENST00000529661 TFECO14948 347 aaPredicted RBP3.78□□□□□ -1.8
C11orf88-204ENST00000529661 HEXBP07686 556 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 MBL2P11226 248 aaPredicted RBP3.78□□□□□ -1.8
C11orf88-204ENST00000529661 GP9P14770 177 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 ZNF10P21506 573 aaPredicted RBP3.78□□□□□ -1.8
C11orf88-204ENST00000529661 MAT2AP31153 395 aaKnown RBP3.78□□□□□ -1.8
C11orf88-204ENST00000529661 PEX19P40855 299 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 TDO2P48775 406 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 NPY2RP49146 381 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 NDST1P52848 882 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 RPS4XP62701 263 aaKnown RBP3.78□□□□□ -1.8
C11orf88-204ENST00000529661 RPS27AP62979 156 aaKnown RBP3.78□□□□□ -1.8
C11orf88-204ENST00000529661 MYBPC1Q00872 1141 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 PDZK1IP1Q13113 114 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 KIAA0141Q14154 515 aaPredicted RBP3.78□□□□□ -1.8
C11orf88-204ENST00000529661 NECTIN1Q15223 517 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 UPP1Q16831 310 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 Q6ZRG5 221 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 PRSS33Q8NF86 280 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 OR52B6Q8NGF0 335 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 FBXO30Q8TB52 745 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 SPPL2AQ8TCT8 520 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 CHPT1Q8WUD6 406 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 PCNPQ8WW12 178 aaKnown RBP3.78□□□□□ -1.8
C11orf88-204ENST00000529661 CCDC51Q96ER9 411 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 DEFB118Q96PH6 123 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 DCTPP1Q9H773 170 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 WDR41Q9HAD4 459 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 SLC25A19Q9HC21 320 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 THEGQ9P2T0 379 aa3.78□□□□□ -1.8
C11orf88-204ENST00000529661 THAP10Q9P2Z0 257 aaPredicted RBP3.78□□□□□ -1.8
C11orf88-204ENST00000529661 MIOXQ9UGB7 285 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms