RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 HORMAD2Q8N7B1 307 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 KDF1Q8NAX2 398 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-211ENST00000528787 OR1N1Q8NGS0 311 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 GFM2Q969S9 779 aaKnown RBP7.42□□□□□ -1.22
SSBP3-211ENST00000528787 ANKRD9Q96BM1 317 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-211ENST00000528787 ROPN1LQ96C74 230 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 THOC1Q96FV9 657 aaKnown RBP7.42□□□□□ -1.22
SSBP3-211ENST00000528787 EGLN2Q96KS0 407 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 CCDC115Q96NT0 180 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 AMDHD1Q96NU7 426 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 CSF3RQ99062 836 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 RBCK1Q9BYM8 510 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 CXorf21Q9HAI6 301 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 MMP25Q9NPA2 562 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 SAR1AQ9NR31 198 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 PNO1Q9NRX1 252 aaKnown RBP7.42□□□□□ -1.22
SSBP3-211ENST00000528787 P4HTMQ9NXG6 502 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 GIN1Q9NXP7 522 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 CES1P1Q9UKY3 287 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 FAF1Q9UNN5 650 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-211ENST00000528787 MAN2B2Q9Y2E5 1009 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 SSUH2Q9Y2M2 353 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 HS3ST3B1Q9Y662 390 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 SPTBN2O15020 2390 aa7.42□□□□□ -1.22
SSBP3-211ENST00000528787 TEX51A0A1B0GUA7 166 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 CDC14CA4D256 554 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 PMS2P1A4D2B8 440 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 GLOD5A6NK44 160 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 FAM227AF5H4B4 570 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 NR5A2O00482 541 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 ANKRD28O15084 1053 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 PGRMC2O15173 223 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 ACOX3O15254 700 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 EFSO43281 561 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 DNAJA2O60884 412 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 ABCB7O75027 752 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 ZFAND5O76080 213 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 B3GALT4O96024 378 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 AK1P00568 194 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 UMODP07911 640 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 SPINK2P20155 84 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 ENDOUP21128 410 aaKnown RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 GPX3P22352 226 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 UQCRC2P22695 453 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 LCN1P31025 176 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 KRT20P35900 424 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 CHI3L1P36222 383 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 FEN1P39748 380 aaKnown RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 UFM1P61960 85 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 BTG2P78543 158 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 FUT7Q11130 342 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 KLF10Q13118 480 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 ERV3-1Q14264 604 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 KRT72Q14CN4 511 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 BTBD16Q32M84 506 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 SPATS1Q496A3 300 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 SPANXN4Q5MJ08 99 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 DCAF10Q5QP82 559 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 C6orf10Q5SRN2 563 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 ATAD3BQ5T9A4 648 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 MTDHQ86UE4 582 aaKnown RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 APLFQ8IW19 511 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 SLC30A8Q8IWU4 369 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 SPACA3Q8IXA5 215 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 CCDC116Q8IYX3 515 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 CDRT4Q8N9R6 151 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 TNIP2Q8NFZ5 429 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 OR7A2PQ8NGA2 310 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 OR11G2Q8NGC1 345 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 OR4A15Q8NGL6 344 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 GOT1L1Q8NHS2 421 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 CLHC1Q8NHS4 586 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 PSMA8Q8TAA3 256 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 NUBPLQ8TB37 319 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 SLC22A8Q8TCC7 542 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 APOBEC4Q8WW27 367 aaKnown RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 OIT3Q8WWZ8 545 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 PMM1Q92871 262 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 POP5Q969H6 163 aaKnown RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 TP53INP1Q96A56 240 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 CNRIP1Q96F85 164 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF354BQ96LW1 612 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF681Q96N22 645 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 DCBLD2Q96PD2 775 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 MS4A4EQ96PG1 132 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 HOPXQ9BPY8 73 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 SPATA9Q9BWV2 254 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 DEFB126Q9BYW3 111 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 LHPPQ9H008 270 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 TRIM45Q9H8W5 580 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 NECTIN3Q9NQS3 549 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 EXD2Q9NVH0 621 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF451Q9Y4E5 1061 aa7.41□□□□□ -1.22
SSBP3-211ENST00000528787 URB1O60287 2271 aaKnown RBP7.41□□□□□ -1.22
SSBP3-211ENST00000528787 A0A096LPI6 279 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 WASHC1A8K0Z3 465 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 MKRN2OSH3BPM6 223 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 K7ENP7 123 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 EBAG9O00559 213 aa7.4□□□□□ -1.22
SSBP3-211ENST00000528787 SOCS6O14544 535 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms