RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 RPN2P04844 631 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 GLULP15104 373 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 SNTA1Q13424 505 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 SHFQ7M4L6 423 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 AMZ2Q86W34 360 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 PPP1R16AQ96I34 528 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 FAIM2Q9BWQ8 316 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 GABARAPL1Q9H0R8 117 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 RLIMQ9NVW2 624 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 SEC14L4Q9UDX3 406 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 WASH3PC4AMC7 463 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 LYRM1O43325 122 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 ERI3O43414 337 aaKnown RBP17.04■□□□□ 0.32
LTBP3-210ENST00000528516 LAG3P18627 525 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 PPIBP23284 216 aaKnown RBP17.04■□□□□ 0.32
LTBP3-210ENST00000528516 SOX9P48436 509 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 RRAS2P62070 204 aaPredicted RBP17.04■□□□□ 0.32
LTBP3-210ENST00000528516 TIAL1Q01085 375 aaKnown RBP eCLIP17.04■□□□□ 0.32
LTBP3-210ENST00000528516 RING1Q06587 406 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 TMIGD1Q6UXZ0 262 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 NAGSQ8N159 534 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 TESCQ96BS2 214 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 F2RL3Q96RI0 385 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 BARHL1Q9BZE3 327 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 OR10H1Q9Y4A9 318 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 LOC285095A0A1B0GVY8 99 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 ABHD14A-ACY1A0A1B0GW23 586 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 C1QTNF3-AMACRE9PGA6 284 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 ACRV1P26436 265 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 ARF5P84085 180 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 SLC14A1Q13336 389 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 CRTC1Q6UUV9 634 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 LMLNQ96KR4 655 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 SLC38A2Q96QD8 506 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 NDRG2Q9UN36 371 aaKnown RBP17.04■□□□□ 0.32
LTBP3-210ENST00000528516 POFUT2Q9Y2G5 429 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 HLA-DQA2P01906 255 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 ARSBP15848 533 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 SDC2P34741 201 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 VIPR2P41587 438 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 C11orf88Q6PI97 169 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 RDH10Q8IZV5 341 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 ZBTB44Q8NCP5 570 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 WBP2Q969T9 261 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 MGME1Q9BQP7 344 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 EIF3KQ9UBQ5 218 aaKnown RBP17.04■□□□□ 0.32
LTBP3-210ENST00000528516 NCKAP1Q9Y2A7 1128 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 CEP350Q5VT06 3117 aa17.04■□□□□ 0.32
LTBP3-210ENST00000528516 GPR68Q15743 365 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 PIGKQ92643 395 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 TIFAQ96CG3 184 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.03■□□□□ 0.32
LTBP3-210ENST00000528516 CLEC2DQ9UHP7 191 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 ZNF638Q14966 1978 aaKnown RBP17.03■□□□□ 0.32
LTBP3-210ENST00000528516 A0A0B4J293 547 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 SLC9A3R1O14745 358 aaPredicted RBP17.03■□□□□ 0.32
LTBP3-210ENST00000528516 TOXO94900 526 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 ANXA8P13928 327 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 HLA-DMAP28067 261 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 NCBP2P52298 156 aaKnown RBP eCLIP17.03■□□□□ 0.32
LTBP3-210ENST00000528516 ITGA1P56199 1179 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 EXOC3L2Q2M3D2 409 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 CTSL3PQ5NE16 218 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 ZBTB37Q5TC79 503 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 ADGRD2Q7Z7M1 963 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 HUS1BQ8NHY5 278 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 WFDC5Q8TCV5 224 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 C11orf24Q96F05 449 aaPredicted RBP17.03■□□□□ 0.32
LTBP3-210ENST00000528516 GTPBP2Q9BX10 602 aaKnown RBP17.03■□□□□ 0.32
LTBP3-210ENST00000528516 CLMPQ9H6B4 373 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 CORO2BQ9UQ03 480 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 ZNF780BQ9Y6R6 833 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 LRRC72A6NJI9 287 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 ALPPP05187 535 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 NT5EP21589 574 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 PPM1AP35813 382 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 CLCN4P51793 760 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 RTN4RL1Q86UN2 441 aaPredicted RBP17.03■□□□□ 0.32
LTBP3-210ENST00000528516 LAPTM4BQ86VI4 370 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 ZNF680Q8NEM1 530 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 AP3S1Q92572 193 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 PITX2Q99697 317 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 NIPSNAP1Q9BPW8 284 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 ENOPH1Q9UHY7 261 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 ATPIF1Q9UII2 106 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 SESN1Q9Y6P5 492 aa17.03■□□□□ 0.32
LTBP3-210ENST00000528516 OR7A17O14581 309 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 RASGRP1O95267 797 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 IFNA7P01567 189 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 CYBAP13498 195 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 CCR7P32248 378 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 RGS1Q08116 209 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 HEPACAMQ14CZ8 416 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 EIF4HQ15056 248 aaKnown RBP17.02■□□□□ 0.32
LTBP3-210ENST00000528516 CFAP77Q6ZQR2 320 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 ABI3BPQ7Z7G0 1075 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 CCDC116Q8IYX3 515 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 P2RY13Q9BPV8 354 aa17.02■□□□□ 0.32
LTBP3-210ENST00000528516 TMEM121BQ9BXQ6 578 aaPredicted RBP17.02■□□□□ 0.32
LTBP3-210ENST00000528516 ACPTQ9BZG2 426 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms