RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 RHCEP18577 417 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 MC3RP41968 323 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 PPP2CBP62714 309 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 PPP2CAP67775 309 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 SGCBQ16585 318 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 KCTD8Q6ZWB6 473 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 DTWD1Q8N5C7 304 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 GATSQ8NAP1 163 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 MAFAQ8NHW3 353 aaPredicted RBP14.3□□□□□ -0.12
USP47-207ENST00000527733 KIR3DX1Q9H7L2 352 aa14.3□□□□□ -0.12
USP47-207ENST00000527733 MTHFD2LQ9H903 347 aaPredicted RBP14.3□□□□□ -0.12
USP47-207ENST00000527733 DICER1Q9UPY3 1922 aaKnown RBP14.3□□□□□ -0.12
USP47-207ENST00000527733 SLC30A4O14863 429 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 TACR1P25103 407 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 XCR1P46094 333 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 ZNF41P51814 821 aaPredicted RBP14.29□□□□□ -0.12
USP47-207ENST00000527733 MS4A2Q01362 244 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 IL18R1Q13478 541 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 SHQ1Q6PI26 577 aaKnown RBP14.29□□□□□ -0.12
USP47-207ENST00000527733 EID2Q8N6I1 236 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 OR9A2Q8NGT5 310 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 GTF2H4Q92759 462 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 RNF31Q96EP0 1072 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 OR5F1O95221 314 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 SOX14O95416 240 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 NADKO95544 446 aaPredicted RBP14.29□□□□□ -0.12
USP47-207ENST00000527733 PLGLB1Q02325 96 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 VWA5B2Q8N398 1253 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 STON2Q8WXE9 905 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 MRGPRX3Q96LB0 322 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 GORASP1Q9BQQ3 440 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 NFKBIL1Q9UBC1 381 aaPredicted RBP14.29□□□□□ -0.12
USP47-207ENST00000527733 FAAHO00519 579 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 CASKO14936 926 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 PKLRP30613 574 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 REEP5Q00765 189 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 SNTA1Q13424 505 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 TMEM215Q68D42 235 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 ZCCHC12Q6PEW1 402 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 HMGN2P46Q86SG4 172 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 LTB4R2Q9NPC1 389 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 EHD3Q9NZN3 535 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 YKT6O15498 198 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 TRIM3O75382 744 aaPredicted RBP14.29□□□□□ -0.12
USP47-207ENST00000527733 PRPF38BQ5VTL8 546 aaKnown RBP14.29□□□□□ -0.12
USP47-207ENST00000527733 CPZQ66K79 652 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 KIAA1211LQ6NV74 962 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 P2RY8Q86VZ1 359 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 METTL25Q8N6Q8 603 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 SLC37A2Q8TED4 501 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 TBC1D29Q9UFV1 150 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 PPIL1Q9Y3C6 166 aa14.29□□□□□ -0.12
USP47-207ENST00000527733 SHROOM3Q8TF72 1996 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 DAPL1A0PJW8 107 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 HMGN2P05204 90 aaKnown RBP14.28□□□□□ -0.12
USP47-207ENST00000527733 CAMK1Q14012 370 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 TRIM61Q5EBN2 209 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 ZNF57Q68EA5 555 aaPredicted RBP14.28□□□□□ -0.12
USP47-207ENST00000527733 HSDL2Q6YN16 418 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 VTCN1Q7Z7D3 282 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 SERPINA11Q86U17 422 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 FAM160A2Q8N612 972 aaPredicted RBP14.28□□□□□ -0.12
USP47-207ENST00000527733 C19orf47Q8N9M1 422 aaKnown RBP14.28□□□□□ -0.12
USP47-207ENST00000527733 C9orf43Q8TAL5 461 aaPredicted RBP14.28□□□□□ -0.12
USP47-207ENST00000527733 CRB3Q9BUF7 120 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 ZNF726A6NNF4 738 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 EFCAB9A8MZ26 197 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 SCO2O43819 266 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 RBMS1P29558 406 aaKnown RBP14.28□□□□□ -0.12
USP47-207ENST00000527733 MAPK11Q15759 364 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 CES4AQ5XG92 561 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 ENPP6Q6UWR7 440 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 FRRS1Q6ZNA5 592 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 ZFPM2Q8WW38 1151 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 OSTF1Q92882 214 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 ASPNQ9BXN1 380 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 MS4A8Q9BY19 250 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 TPK1Q9H3S4 243 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 MBTPS2O43462 519 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 KCNAB2Q13303 367 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 ETFBKMTQ8IXQ9 262 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 OR2T11Q8NH01 316 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 TRPV4Q9HBA0 871 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 C1GALT1Q9NS00 363 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 ACSS1Q9NUB1 689 aaPredicted RBP14.28□□□□□ -0.12
USP47-207ENST00000527733 PLXNA1Q9UIW2 1896 aa14.28□□□□□ -0.12
USP47-207ENST00000527733 TMX2-CTNND1H3BSU7 103 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 CPNE3O75131 537 aaKnown RBP14.27□□□□□ -0.12
USP47-207ENST00000527733 CH25HO95992 272 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 EMP2P54851 167 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 NPTX1Q15818 432 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 TLDC1Q6P9B6 456 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 SPRED2Q7Z698 418 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 SLC22A8Q8TCC7 542 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 NETO1Q8TDF5 533 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 GNPDA2Q8TDQ7 276 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 EZH1Q92800 747 aaPredicted RBP14.27□□□□□ -0.12
USP47-207ENST00000527733 EFHD2Q96C19 240 aaPredicted RBP14.27□□□□□ -0.12
USP47-207ENST00000527733 TMCO6Q96DC7 493 aa14.27□□□□□ -0.12
USP47-207ENST00000527733 HHATLQ9HCP6 504 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms