RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 DAPP1Q9UN19 280 aa17.68■□□□□ 0.42
SMPD1-203ENST00000527275 A0A1W2PR48 441 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 TM4SF5O14894 197 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 PRSS23O95084 383 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 NUDT7P0C024 238 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 CCL4P13236 92 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 ZNF23P17027 643 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 ALAS2P22557 587 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 KDELR2P33947 212 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 EMP3P54852 163 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 TRA2BP62995 288 aaKnown RBP17.67■□□□□ 0.42
SMPD1-203ENST00000527275 VEZF1Q14119 521 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 ISXQ2M1V0 245 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 LRRC23Q53EV4 343 aaPredicted RBP17.67■□□□□ 0.42
SMPD1-203ENST00000527275 NDUFAF5Q5TEU4 345 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 CDCP2Q5VXM1 449 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 ANGPTL8Q6UXH0 198 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 METTL27Q8N6F8 245 aaPredicted RBP17.67■□□□□ 0.42
SMPD1-203ENST00000527275 NATD1Q8N6N6 113 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 BMPERQ8N8U9 685 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 UCN3Q969E3 161 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 KCMF1Q9P0J7 381 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 UTS2RQ9UKP6 389 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 RARRES3Q9UL19 164 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 SAMD4AQ9UPU9 718 aaKnown RBP17.67■□□□□ 0.42
SMPD1-203ENST00000527275 SCN2AQ99250 2005 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 RDH16O75452 317 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 PRKRAO75569 313 aaKnown RBP17.67■□□□□ 0.42
SMPD1-203ENST00000527275 TIAF1O95411 115 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 HOXB6P17509 224 aaKnown RBP17.67■□□□□ 0.42
SMPD1-203ENST00000527275 DDX5P17844 614 aaKnown RBP17.67■□□□□ 0.42
SMPD1-203ENST00000527275 CRATP43155 626 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 GCGRP47871 477 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 CHN2P52757 468 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 LIM2P55344 173 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 NHSL2Q5HYW2 709 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 C18orf63Q68DL7 685 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 FAM180BQ6P0A1 224 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 CMKLR1Q99788 373 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 NDC1Q9BTX1 674 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 GPATCH2Q9NW75 528 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 DNAJB9Q9UBS3 223 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 ZNF639Q9UID6 485 aa17.67■□□□□ 0.42
SMPD1-203ENST00000527275 WASHC1A8K0Z3 465 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 UPK1AO00322 258 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 PROM1O43490 865 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 GFRA3O60609 400 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 ZNF682O95780 498 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 CST1P01037 141 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 MVDP53602 400 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 SIM1P81133 766 aaPredicted RBP17.66■□□□□ 0.42
SMPD1-203ENST00000527275 PWWP2BQ6NUJ5 590 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 PPP1R3BQ86XI6 285 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 OR52N2Q8NGI0 321 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 OR10Q1Q8NGQ4 319 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 CTRCQ99895 268 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 TRIM4Q9C037 500 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 C5AR2Q9P296 337 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 FAF1Q9UNN5 650 aaPredicted RBP17.66■□□□□ 0.42
SMPD1-203ENST00000527275 TMEM184BQ9Y519 407 aaPredicted RBP17.66■□□□□ 0.42
SMPD1-203ENST00000527275 GLOD5A6NK44 160 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 EI24O14681 340 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 NSA2O95478 260 aaKnown RBP17.66■□□□□ 0.42
SMPD1-203ENST00000527275 FTH1P19P0C7X4 201 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 CSRP1P21291 193 aaKnown RBP17.66■□□□□ 0.42
SMPD1-203ENST00000527275 VAC14Q08AM6 782 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 GK3PQ14409 553 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 COX20Q5RI15 118 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 TMBIM1Q969X1 311 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 MMABQ96EY8 250 aaPredicted RBP17.66■□□□□ 0.42
SMPD1-203ENST00000527275 LYARQ9NX58 379 aaKnown RBP17.66■□□□□ 0.42
SMPD1-203ENST00000527275 NDOR1Q9UHB4 597 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 RPS6KA6Q9UK32 745 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 MAU2Q9Y6X3 613 aa17.66■□□□□ 0.42
SMPD1-203ENST00000527275 DLGAP1O14490 977 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 POLR1CO15160 346 aaPredicted RBP17.65■□□□□ 0.42
SMPD1-203ENST00000527275 GUCY1B2O75343 617 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 CSO75390 466 aaKnown RBP17.65■□□□□ 0.42
SMPD1-203ENST00000527275 AIFM1O95831 613 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 MT-CO3P00414 261 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 ATXN8OSP0DMR3 200 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 CHI3L1P36222 383 aaPredicted RBP17.65■□□□□ 0.42
SMPD1-203ENST00000527275 MANFP55145 182 aaKnown RBP17.65■□□□□ 0.42
SMPD1-203ENST00000527275 CASP9P55211 416 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 SKP1P63208 163 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 IL11RAQ14626 422 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 HES3Q5TGS1 186 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 FKBP9P1Q75LS8 142 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 SLC38A9Q8NBW4 561 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 OR5AK3PQ8NH89 298 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 OR5P2Q8WZ92 322 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 MAL2Q969L2 176 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 STRADBQ9C0K7 418 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 ACSL6Q9UKU0 697 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 PCDHGB5Q9Y5G0 923 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 DCHS1Q96JQ0 3298 aa17.65■□□□□ 0.42
SMPD1-203ENST00000527275 A6NHS1 94 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 GNGT2O14610 69 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 PDPK1O15530 556 aa17.64■□□□□ 0.42
SMPD1-203ENST00000527275 SMNDC1O75940 238 aaKnown RBP eCLIP17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms