RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 BCKDHAP12694 445 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 S1PR1P21453 382 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 TACR1P25103 407 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 C21orf58P58505 322 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 ERVK-8P63133 956 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 PPP2R2AP63151 447 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 C2orf80Q0P641 193 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 MGAT2Q10469 447 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 PDE7AQ13946 482 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 PLEKHN1Q494U1 663 aaPredicted RBP16.03■□□□□ 0.16
LMX1B-203ENST00000526117 C6orf163Q5TEZ5 329 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 FCRLBQ6BAA4 426 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 C9orf40Q8IXQ3 194 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 VWA5B2Q8N398 1253 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 SLC15A4Q8N697 577 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 ZNF321PQ8N8H1 164 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 MDS2Q8NDY4 140 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 C17orf47Q8NEP4 570 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 BARD1Q99728 777 aaKnown RBP16.03■□□□□ 0.16
LMX1B-203ENST00000526117 UTP23Q9BRU9 249 aaKnown RBP16.03■□□□□ 0.16
LMX1B-203ENST00000526117 EPN3Q9H201 632 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 MIEF1Q9NQG6 463 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 ERVK-19Q9WJR5 959 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 ENTPD4Q9Y227 616 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 ZNF462Q96JM2 2506 aa16.03■□□□□ 0.16
LMX1B-203ENST00000526117 UQCRHLA0A096LP55 91 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 HRKO00198 91 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 PRKNO60260 465 aaPredicted RBP16.02■□□□□ 0.16
LMX1B-203ENST00000526117 MAN1A2O60476 641 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 ERAL1O75616 437 aaKnown RBP16.02■□□□□ 0.16
LMX1B-203ENST00000526117 JUNP05412 331 aaKnown RBP16.02■□□□□ 0.16
LMX1B-203ENST00000526117 DDX5P17844 614 aaKnown RBP16.02■□□□□ 0.16
LMX1B-203ENST00000526117 MPIP34949 423 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 HLCSP50747 726 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 EMX2Q04743 252 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 ZNF267Q14586 743 aaPredicted RBP16.02■□□□□ 0.16
LMX1B-203ENST00000526117 GALNTL6Q49A17 601 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 RNF111Q6ZNA4 994 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 ZNF605Q86T29 641 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 ZNF615Q8N8J6 731 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 SUN3Q8TAQ9 357 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 ZNF75CPQ92670 426 aaPredicted RBP16.02■□□□□ 0.16
LMX1B-203ENST00000526117 TUBGCP3Q96CW5 907 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 EGLN2Q96KS0 407 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 CNPPD1Q9BV87 410 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 MFRPQ9BY79 579 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 REEP4Q9H6H4 257 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 SLAMF7Q9NQ25 335 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 MAT2BQ9NZL9 334 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 CFL2Q9Y281 166 aa16.02■□□□□ 0.16
LMX1B-203ENST00000526117 ATP6AP2A0A1C7CYW4 349 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 HDAC3O15379 428 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 ATP8B1O43520 1251 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 PRAMEF2O60811 474 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 PEX11AO75192 247 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 ITGA10O75578 1167 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 ATP6AP2O75787 350 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 BCAS2O75934 225 aaPredicted RBP16.01■□□□□ 0.15
LMX1B-203ENST00000526117 NEURL1O76050 574 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 CT62P0C5K7 136 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 SOX18P35713 384 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 RPL3P39023 403 aaKnown RBP16.01■□□□□ 0.15
LMX1B-203ENST00000526117 FEN1P39748 380 aaKnown RBP16.01■□□□□ 0.15
LMX1B-203ENST00000526117 CD96P40200 585 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 FRKP42685 505 aaPredicted RBP16.01■□□□□ 0.15
LMX1B-203ENST00000526117 CYB561P49447 251 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 SSR4P51571 173 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 DUSP2Q05923 314 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 EBPQ15125 230 aaKnown RBP16.01■□□□□ 0.15
LMX1B-203ENST00000526117 PDCD2Q16342 344 aaPredicted RBP16.01■□□□□ 0.15
LMX1B-203ENST00000526117 ZNF750Q32MQ0 723 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 ZNF628Q5EBL2 1059 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 OGFOD2Q6N063 350 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 SLC29A4Q7RTT9 530 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 R3HCC1LQ7Z5L2 792 aaKnown RBP16.01■□□□□ 0.15
LMX1B-203ENST00000526117 TICAM1Q8IUC6 712 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 DND1Q8IYX4 353 aaKnown RBP16.01■□□□□ 0.15
LMX1B-203ENST00000526117 ZNF441Q8N8Z8 693 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 FNDC5Q8NAU1 212 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 TP53INP1Q96A56 240 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 EXOSC8Q96B26 276 aaKnown RBP16.01■□□□□ 0.15
LMX1B-203ENST00000526117 SCMH1Q96GD3 660 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 C7orf26Q96N11 449 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 PLA2G3Q9NZ20 509 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 NOP53Q9NZM5 478 aaKnown RBP16.01■□□□□ 0.15
LMX1B-203ENST00000526117 MAPRE3Q9UPY8 281 aa16.01■□□□□ 0.15
LMX1B-203ENST00000526117 A0A087WV62 115 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 TRPC5OSA6NMA1 111 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 SLC28A2O43868 658 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 PLOD3O60568 738 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 NT5EP21589 574 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 PIGGQ5H8A4 983 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 LARP4Q71RC2 724 aaKnown RBP eCLIP16■□□□□ 0.15
LMX1B-203ENST00000526117 PRICKLE2Q7Z3G6 844 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 ZNF227Q86WZ6 799 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 FAM9CQ8IZT9 166 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 NATD1Q8N6N6 113 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 CATSPER1Q8NEC5 780 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 RASL10BQ96S79 203 aa16■□□□□ 0.15
LMX1B-203ENST00000526117 WWTR1Q9GZV5 400 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms