RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CCL3P10147 92 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 GALNSP34059 522 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 PER3P56645 1201 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 DNAJB13P59910 316 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 PLGLB1Q02325 96 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 ACSM2AQ08AH3 577 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 PCLAFQ15004 111 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 EBPQ15125 230 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 MPEG1Q2M385 716 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 ACSM2BQ68CK6 577 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 WDR93Q6P2C0 686 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 EMBQ6PCB8 327 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 LYPD8Q6UX82 237 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 TMEM64Q6YI46 380 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 TRABD2AQ86V40 505 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 SRRM1Q8IYB3 904 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 GBP7Q8N8V2 638 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 BANPQ8N9N5 519 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 ZFP62Q8NB50 900 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 POGLUT1Q8NBL1 392 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 ADCY4Q8NFM4 1077 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 OR2M7Q8NG81 312 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 OR52N2Q8NGI0 321 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 SLC22A8Q8TCC7 542 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 RELTQ969Z4 430 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 KLHL29Q96CT2 875 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 MAGED4Q96JG8 741 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 FAIM2Q9BWQ8 316 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 PARD6BQ9BYG5 372 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 BRINP2Q9C0B6 783 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 DEFB127Q9H1M4 99 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 SLC17A7Q9P2U7 560 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 MCM8Q9UJA3 840 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 TINAGQ9UJW2 476 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 DLGAP4Q9Y2H0 992 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 PLLPQ9Y342 182 aa11.87□□□□□ -0.51
TRAPPC4-205ENST00000525079 C2orf92A0A1B0GVN3 265 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 ABCB7O75027 752 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 LRATO95237 230 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 P04436 131 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 ABOP16442 354 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 CSNK2A2P19784 350 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 CNR1P21554 472 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 PIGAP37287 484 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 CA7P43166 264 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 DNASE1L1P49184 302 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 PPIAP62937 165 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 TRA2BP62995 288 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 EXOSC7Q15024 291 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 LTB4RQ15722 352 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 IMPG1Q17R60 797 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 ZNF791Q3KP31 576 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 C6orf163Q5TEZ5 329 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 LIPMQ5VYY2 423 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 CLEC6AQ6EIG7 209 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 FAM47EQ6ZV65 393 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 MAMDC2Q7Z304 686 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 FGD2Q7Z6J4 655 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 SPPL2CQ8IUH8 684 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 GHDCQ8N2G8 530 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 RIBC1Q8N443 379 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 ZNF615Q8N8J6 731 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 SIMC1Q8NDZ2 872 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 OR5M3Q8NGP4 307 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 C16orf52Q8NHV5 167 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 CDC26Q8NHZ8 85 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 C16orf78Q8WTQ4 265 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 CAVIN3Q969G5 261 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 EXOSC8Q96B26 276 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 APOPT1Q96IL0 206 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 FAM111AQ96PZ2 611 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 GATA5Q9BWX5 397 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 IQCGQ9H095 443 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 OR10A5Q9H207 317 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 PFDN4Q9NQP4 134 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 SACM1LQ9NTJ5 587 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 BCAP29Q9UHQ4 241 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 LGALS13Q9UHV8 139 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 UTS2RQ9UKP6 389 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 FIS1Q9Y3D6 152 aa11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 USP9YO00507 2555 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-205ENST00000525079 A0A1B0GTH9 108 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 GOLGA6L10A6NI86 522 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 OR6C76A6NM76 312 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 TRIM13O60858 407 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 ANXA4P09525 319 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 CREB1P16220 341 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 S1PR1P21453 382 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 ALDH3A1P30838 453 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 TIA1P31483 386 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 CASP6P55212 293 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 MGAT2Q10469 447 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 FUT7Q11130 342 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 PRICKLE4Q2TBC4 344 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 SPIN4Q56A73 249 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 CMPK2Q5EBM0 449 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 PRAMEF20Q5VT98 475 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 HLA-DQA1Q5Y7H0 255 aa11.85□□□□□ -0.51
TRAPPC4-205ENST00000525079 C3P1Q6ZMU1 363 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms