RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 VPS4BO75351 444 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 SKAP2O75563 359 aaPredicted RBP14.03□□□□□ -0.16
SF3B2-202ENST00000524475 ERAL1O75616 437 aaKnown RBP14.03□□□□□ -0.16
SF3B2-202ENST00000524475 CLPSP04118 112 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 PRPS2P11908 318 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 BCKDHAP12694 445 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 PCSK2P16519 638 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 DDX5P17844 614 aaKnown RBP14.03□□□□□ -0.16
SF3B2-202ENST00000524475 TACR1P25103 407 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 ERVK-8P63133 956 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 PPP2R2AP63151 447 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 MGAT2Q10469 447 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 MAD2L1Q13257 205 aaPredicted RBP14.03□□□□□ -0.16
SF3B2-202ENST00000524475 TUBA3CQ13748 450 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 PDE7AQ13946 482 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 PRICKLE4Q2TBC4 344 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 GALNTL6Q49A17 601 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 C6orf163Q5TEZ5 329 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 FCRLBQ6BAA4 426 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 TUBA3EQ6PEY2 450 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 ZNF605Q86T29 641 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 HORMAD2Q8N7B1 307 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 ZNF321PQ8N8H1 164 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 MDS2Q8NDY4 140 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 C17orf47Q8NEP4 570 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 TUBGCP3Q96CW5 907 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 UTP23Q9BRU9 249 aaKnown RBP14.03□□□□□ -0.16
SF3B2-202ENST00000524475 MFRPQ9BY79 579 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 MEAF6Q9HAF1 191 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 SLAMF7Q9NQ25 335 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 MIEF1Q9NQG6 463 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 ZNF446Q9NWS9 450 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 ERVK-19Q9WJR5 959 aa14.03□□□□□ -0.16
SF3B2-202ENST00000524475 UQCRHLA0A096LP55 91 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 ATP6AP2A0A1C7CYW4 349 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 MYO1GB0I1T2 1018 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 HRKO00198 91 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 MAN1A2O60476 641 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 PEX11AO75192 247 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 ITGA10O75578 1167 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 ATP6AP2O75787 350 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 JUNP05412 331 aaKnown RBP14.02□□□□□ -0.17
SF3B2-202ENST00000524475 S1PR1P21453 382 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 NT5EP21589 574 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 MPIP34949 423 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 RPL3P39023 403 aaKnown RBP14.02□□□□□ -0.17
SF3B2-202ENST00000524475 FEN1P39748 380 aaKnown RBP14.02□□□□□ -0.17
SF3B2-202ENST00000524475 HLCSP50747 726 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 C21orf58P58505 322 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 EMX2Q04743 252 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 ZNF267Q14586 743 aaPredicted RBP14.02□□□□□ -0.17
SF3B2-202ENST00000524475 EBPQ15125 230 aaKnown RBP14.02□□□□□ -0.17
SF3B2-202ENST00000524475 RNF111Q6ZNA4 994 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 TICAM1Q8IUC6 712 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 C9orf40Q8IXQ3 194 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 VWA5B2Q8N398 1253 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 SLC15A4Q8N697 577 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 ZNF615Q8N8J6 731 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 FNDC5Q8NAU1 212 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 SUN3Q8TAQ9 357 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 ZNF75CPQ92670 426 aaPredicted RBP14.02□□□□□ -0.17
SF3B2-202ENST00000524475 EXOSC8Q96B26 276 aaKnown RBP14.02□□□□□ -0.17
SF3B2-202ENST00000524475 EGLN2Q96KS0 407 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 BARD1Q99728 777 aaKnown RBP14.02□□□□□ -0.17
SF3B2-202ENST00000524475 CNPPD1Q9BV87 410 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 REEP4Q9H6H4 257 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 PLA2G3Q9NZ20 509 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 MAT2BQ9NZL9 334 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 CFL2Q9Y281 166 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 MYO18BQ8IUG5 2567 aa14.02□□□□□ -0.17
SF3B2-202ENST00000524475 HDAC3O15379 428 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 ATP8B1O43520 1251 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 SLC28A2O43868 658 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 PRAMEF2O60811 474 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 BCAS2O75934 225 aaPredicted RBP14.01□□□□□ -0.17
SF3B2-202ENST00000524475 NEURL1O76050 574 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 CT62P0C5K7 136 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 SOX18P35713 384 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 CD96P40200 585 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 FRKP42685 505 aaPredicted RBP14.01□□□□□ -0.17
SF3B2-202ENST00000524475 CYB561P49447 251 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 SSR4P51571 173 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 DUSP2Q05923 314 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 PDCD2Q16342 344 aaPredicted RBP14.01□□□□□ -0.17
SF3B2-202ENST00000524475 ZNF750Q32MQ0 723 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 ZNF628Q5EBL2 1059 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 OGFOD2Q6N063 350 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 SLC29A4Q7RTT9 530 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 PRICKLE2Q7Z3G6 844 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 R3HCC1LQ7Z5L2 792 aaKnown RBP14.01□□□□□ -0.17
SF3B2-202ENST00000524475 DND1Q8IYX4 353 aaKnown RBP14.01□□□□□ -0.17
SF3B2-202ENST00000524475 FAM9CQ8IZT9 166 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 ZNF441Q8N8Z8 693 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 CATSPER1Q8NEC5 780 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 TP53INP1Q96A56 240 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 SCMH1Q96GD3 660 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 C7orf26Q96N11 449 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 RASL10BQ96S79 203 aa14.01□□□□□ -0.17
SF3B2-202ENST00000524475 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.01□□□□□ -0.17
SF3B2-202ENST00000524475 PNPOQ9NVS9 261 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms