RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 RNF175Q8N4F7 328 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 FBXO36Q8NEA4 188 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 UBE2E3Q969T4 207 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 WDYHV1Q96HA8 205 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 RILPQ96NA2 401 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 GNRHR2Q96P88 292 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 UGT2B28Q9BY64 529 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 CD244Q9BZW8 370 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 NSMCE4AQ9NXX6 385 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 PHF11Q9UIL8 331 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 C15orf41Q9Y2V0 281 aa20.79■□□□□ 0.92
PVT1-218ENST00000523328 TP53I11O14683 189 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 TP73O15350 636 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 RPL21P46778 160 aaKnown RBP20.78■□□□□ 0.92
PVT1-218ENST00000523328 FBXW4P57775 412 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 ATP6V0D1P61421 351 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 POU4F3Q15319 338 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 SHEQ5VZ18 495 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 LRRC70Q7Z2Q7 622 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 CXorf67Q86X51 503 aaPredicted RBP20.78■□□□□ 0.92
PVT1-218ENST00000523328 ZCCHC7Q8N3Z6 543 aaKnown RBP20.78■□□□□ 0.92
PVT1-218ENST00000523328 SPPL2AQ8TCT8 520 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 RIT1Q92963 219 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 PELOQ9BRX2 385 aaKnown RBP20.78■□□□□ 0.92
PVT1-218ENST00000523328 YIPF4Q9BSR8 244 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 ANGPTL4Q9BY76 406 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 CALHM2Q9HA72 323 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 MED12LQ86YW9 2145 aa20.78■□□□□ 0.92
PVT1-218ENST00000523328 CES2O00748 559 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 PLPP1O14494 284 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 SNX4O95219 450 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 GPR75O95800 540 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 SERPINB1P30740 379 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 TLX1P31314 330 aaPredicted RBP20.77■□□□□ 0.92
PVT1-218ENST00000523328 PCDH1Q08174 1060 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 PDIA2Q13087 525 aaKnown RBP20.77■□□□□ 0.92
PVT1-218ENST00000523328 EIPR1Q53HC9 387 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 TAOK1Q7L7X3 1001 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 C9orf106Q8NAJ2 232 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 RGMAQ96B86 450 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 NTNG2Q96CW9 530 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 ZNF717Q9BY31 904 aaPredicted RBP20.77■□□□□ 0.92
PVT1-218ENST00000523328 PRM3Q9NNZ6 103 aa20.77■□□□□ 0.92
PVT1-218ENST00000523328 TLN2Q9Y4G6 2542 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 C2orf92A0A1B0GVN3 265 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 CAPN14A8MX76 684 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 E7ESA3 106 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 OR10H2O60403 315 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 GALNSP34059 522 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 BUD31P41223 144 aaPredicted RBP20.76■□□□□ 0.91
PVT1-218ENST00000523328 ILF2Q12905 390 aaKnown RBP20.76■□□□□ 0.91
PVT1-218ENST00000523328 MRM1Q6IN84 353 aaKnown RBP20.76■□□□□ 0.91
PVT1-218ENST00000523328 PRIMA1Q86XR5 153 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 SLC35F6Q8N357 371 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 HUS1BQ8NHY5 278 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 EXT2Q93063 718 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 TP53INP1Q96A56 240 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 TSPAN17Q96FV3 270 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 UBXN10Q96LJ8 280 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 DACH2Q96NX9 599 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 SECISBP2Q96T21 854 aaKnown RBP20.76■□□□□ 0.91
PVT1-218ENST00000523328 SNX15Q9NRS6 342 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 TEX10Q9NXF1 929 aaPredicted RBP20.76■□□□□ 0.91
PVT1-218ENST00000523328 RNF112Q9ULX5 631 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 SNX12Q9UMY4 172 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 NPFFR2Q9Y5X5 522 aa20.76■□□□□ 0.91
PVT1-218ENST00000523328 SEC31AO94979 1220 aaKnown RBP20.75■□□□□ 0.91
PVT1-218ENST00000523328 SSTR4P31391 388 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 SOX18P35713 384 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 CASP3P42574 277 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 SLCO1A2P46721 670 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 MASP1P48740 699 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 RAP1GDS1P52306 607 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 NAGLUP54802 743 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 FOXF2Q12947 444 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 DDX39BQ13838 428 aaKnown RBP20.75■□□□□ 0.91
PVT1-218ENST00000523328 WIPI1Q5MNZ9 446 aaPredicted RBP20.75■□□□□ 0.91
PVT1-218ENST00000523328 PACS2Q86VP3 889 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 SMPDL3BQ92485 455 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 ABTB1Q969K4 478 aaPredicted RBP20.75■□□□□ 0.91
PVT1-218ENST00000523328 RBM24Q9BX46 236 aaKnown RBP20.75■□□□□ 0.91
PVT1-218ENST00000523328 ZNF395Q9H8N7 513 aaPredicted RBP20.75■□□□□ 0.91
PVT1-218ENST00000523328 ADGRE2Q9UHX3 823 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 ASB4Q9Y574 426 aa20.75■□□□□ 0.91
PVT1-218ENST00000523328 A0A1W2PR48 441 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 GLOD5A6NK44 160 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 FAM171A2A8MVW0 826 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 TMPRSS11DO60235 418 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 LY6G6DO95868 133 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 S100BP04271 92 aaPredicted RBP20.74■□□□□ 0.91
PVT1-218ENST00000523328 TMIGD3P0DMS9 266 aaPredicted RBP20.74■□□□□ 0.91
PVT1-218ENST00000523328 GMPRP36959 345 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 PIK3CBP42338 1070 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 ARFIP1P53367 373 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 ZKSCAN8Q15776 578 aaPredicted RBP20.74■□□□□ 0.91
PVT1-218ENST00000523328 GRHL2Q6ISB3 625 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 CSPG4Q6UVK1 2322 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 ZPLD1Q8TCW7 415 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 UCN3Q969E3 161 aa20.74■□□□□ 0.91
PVT1-218ENST00000523328 ADIPOR1Q96A54 375 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms