RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 WDR45Q9Y484 360 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 CSDC2Q9Y534 153 aaKnown RBP3.68□□□□□ -1.82
SKP1-209ENST00000522552 RIPK3Q9Y572 518 aa3.68□□□□□ -1.82
SKP1-209ENST00000522552 TAF1P21675 1872 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 SALL1Q9NSC2 1324 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 MED19A0JLT2 244 aaPredicted RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 I6L893 689 aaPredicted RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 GAPDHSO14556 408 aaPredicted RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 BCKDKO14874 412 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 STX7O15400 261 aaKnown RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 HSPA12AO43301 675 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 FAM20BO75063 409 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 SCGNO76038 276 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 BMP10O95393 424 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 EML2O95834 649 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 VTNP04004 478 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 GSTA2P09210 222 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 CCNB1P14635 433 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 ZNF10P21506 573 aaPredicted RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 CASP14P31944 242 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 CD80P33681 288 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 SFTPDP35247 375 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 PTGS2P35354 604 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 MPLP40238 635 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 OR3A3P47888 321 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 CASP4P49662 377 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 SLC26A2P50443 739 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 NDST1P52848 882 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 NDST2P52849 883 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 BLVRAP53004 296 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 HOXA4Q00056 320 aaPredicted RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 RCAN2Q14206 197 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 KRT81Q14533 505 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 CDSNQ15517 529 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 SBK1Q52WX2 424 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 LCN1P1Q5VSP4 162 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 RTL6Q6ICC9 239 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 SNRNP48Q6IEG0 339 aaKnown RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 OR4F3Q6IEY1 312 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 CAPRIN2Q6IMN6 1127 aaKnown RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 LINGO4Q6UY18 593 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 KIAA1328Q86T90 577 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 FAM58AQ8N1B3 248 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 SPEM1Q8N4L4 309 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 CPSF7Q8N684 471 aaKnown RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 DNAAF3Q8N9W5 541 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 FNDC5Q8NAU1 212 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 ADAD2Q8NCV1 583 aaKnown RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 THAP6Q8TBB0 222 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 SLC35F5Q8WV83 523 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 ASB5Q8WWX0 329 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 IRGQQ8WZA9 623 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 NRGNQ92686 78 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 SLC38A4Q969I6 547 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 LRRC45Q96CN5 670 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 PPP1R16AQ96I34 528 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 FAM84BQ96KN1 310 aaPredicted RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 AMDHD1Q96NU7 426 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 RIT2Q99578 217 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 MAP3K3Q99759 626 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 ST6GALNAC5Q9BVH7 336 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 ROGDIQ9GZN7 287 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 DPEP2Q9H4A9 486 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 NARFLQ9H6Q4 476 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 AZI2Q9H6S1 392 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 MRPS30Q9NP92 439 aaKnown RBP3.67□□□□□ -1.82
SKP1-209ENST00000522552 MAN2C1Q9NTJ4 1040 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 PTTG3PQ9NZH4 202 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 RPH3ALQ9UNE2 315 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 YIPF1Q9Y548 306 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 ATP6V1DQ9Y5K8 247 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 NPTNQ9Y639 398 aa3.67□□□□□ -1.82
SKP1-209ENST00000522552 PPIAL4EA0A075B759 164 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 A0A0G2JLL6 359 aaPredicted RBP3.66□□□□□ -1.82
SKP1-209ENST00000522552 LOC390937A0A1W2PQ73 354 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 TUBAL3A6NHL2 446 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 LRRC30A6NM36 301 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 A8MU76 341 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 H0YL77 283 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PDLIM1O00151 329 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 NR5A2O00482 541 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 TIMM23O14925 209 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 NDUFS7O75251 213 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 CDK14O94921 469 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 TSPAN15O95858 294 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 CLPTM1O96005 669 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 ERCC1P07992 297 aaPredicted RBP3.66□□□□□ -1.82
SKP1-209ENST00000522552 PPIAL4FP0DN26 164 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 POU2F1P14859 743 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 ETS2P15036 469 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 MSH3P20585 1137 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 GSTM3P21266 225 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 NR4A1P22736 598 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 STX2P32856 288 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 GRIA3P42263 894 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 CLDN17P56750 224 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 GSTO1P78417 241 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 ZFP36L1Q07352 338 aaKnown RBP3.66□□□□□ -1.82
SKP1-209ENST00000522552 ST3GAL1Q11201 340 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 CTF1Q16619 201 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms