RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 C14orf166Q9Y224 244 aaKnown RBP15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 EN2P19622 333 aaPredicted RBP15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 FIGNL1Q6PIW4 674 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 B3GNT9Q6UX72 402 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 NANOS1Q8WY41 292 aaKnown RBP15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 THAP4Q8WY91 577 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 DTD2Q96FN9 168 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF559Q9BR84 538 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 UGDHO60701 494 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 ADAM15Q13444 863 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 PPP1R3AQ16821 1122 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 MAMDC2Q7Z304 686 aaPredicted RBP15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 PAQR7Q86WK9 346 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 CLEC1AQ8NC01 280 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 OR51G2Q8NGK0 314 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 S100A16Q96FQ6 103 aaKnown RBP15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 PRR11Q96HE9 360 aaPredicted RBP15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 HEBP1Q9NRV9 189 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 SCAMP2O15127 329 aaKnown RBP15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 HSD11B2P80365 405 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 CDKL1Q00532 357 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 CRYZQ08257 329 aaKnown RBP15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 LRIT3Q3SXY7 679 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 TCEAL4Q96EI5 215 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 MSANTD3Q96H12 275 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 CSNK1DP48730 415 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 TOR3AQ9H497 397 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 SMAD6O43541 496 aaKnown RBP15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 IRF2P14316 349 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 GAS6Q14393 721 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 SCGB2B2Q4G0G5 96 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 NDUFAF5Q5TEU4 345 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 TAS1R1Q7RTX1 841 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF784Q8NCA9 323 aaPredicted RBP15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 OR5AR1Q8NGP9 310 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 DPAGT1Q9H3H5 408 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 PCDHGA3Q9Y5H0 932 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 AP1M2Q9Y6Q5 423 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 FLRT2O43155 660 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF35P13682 527 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 PRKCAP17252 672 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 GJA4P35212 333 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 TDGQ13569 410 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 ARHGAP19Q14CB8 494 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 C6orf89Q6UWU4 347 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 LIPIQ6XZB0 460 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF611Q8N823 705 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 INO80EQ8NBZ0 244 aaPredicted RBP15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 RTP4Q96DX8 246 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 PGAM5Q96HS1 289 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 CCDC115Q96NT0 180 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 METTL8Q9H825 291 aaKnown RBP15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 MTHFD2LQ9H903 347 aaPredicted RBP15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 OR6C2Q9NZP2 312 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 BAIAP2Q9UQB8 552 aa15.49■□□□□ 0.07
PCDHA3-201ENST00000522353 TEX13DA0A0J9YY54 714 aaPredicted RBP15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 HTR1EP28566 365 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 GCGRP47871 477 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 CDK3Q00526 305 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 GRB7Q14451 532 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 CARD17Q5XLA6 110 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 PARS2Q7L3T8 475 aaKnown RBP15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 COMMD6Q7Z4G1 85 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 MFSD6LQ8IWD5 586 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 C3orf58Q8NDZ4 430 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 DDIT4LQ96D03 193 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF778Q96MU6 729 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 CHIAQ9BZP6 476 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 TRPV4Q9HBA0 871 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 GJD2Q9UKL4 321 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 ABCB7O75027 752 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 RAD51DO75771 328 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 EIF5AL1Q6IS14 154 aaKnown RBP15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 ARHGAP11AQ6P4F7 1023 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF773Q6PK81 442 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 LCTLQ6UWM7 567 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 OR52B6Q8NGF0 335 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 PITHD1Q9GZP4 211 aaPredicted RBP15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 CSNK1G1Q9HCP0 422 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 SPO11Q9Y5K1 396 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 NFS1Q9Y697 457 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 A0A0G2JPF8 293 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 HNRNPCL3B7ZW38 293 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 FESP07332 822 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 HNRNPCL4P0DMR1 293 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 RHCEP18577 417 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 AKR1D1P51857 326 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 CLDN2P57739 230 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 ADAM17P78536 824 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 HMBOX1Q6NT76 420 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 METTL2BQ6P1Q9 378 aaKnown RBP15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 VN1R2Q8NFZ6 395 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 KCNN1Q92952 543 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 FUBP1Q96AE4 644 aaKnown RBP15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 ACTRT3Q9BYD9 372 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 C4BP0C0L5 1744 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 CDRT1O95170 752 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 HOXB9P17482 250 aaPredicted RBP15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 PRKACGP22612 351 aa15.48■□□□□ 0.07
PCDHA3-201ENST00000522353 CDH15P55291 814 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms