RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 LMAN1P49257 510 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 STC1P52823 247 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 HNRNPH2P55795 449 aaKnown RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 BRWD1-AS2P59051 145 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 RPS21P63220 83 aaKnown RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CDK16Q00536 496 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 SORDQ00796 357 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 DR1Q01658 176 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CREB5Q02930 508 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 C2orf54Q08AI8 447 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 ELP6Q0PNE2 266 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 RALGDSQ12967 914 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 SRSF5Q13243 272 aaKnown RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 SGCGQ13326 291 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 MSLNQ13421 630 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 PTK6Q13882 451 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 PPP1R7Q15435 360 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 TRIP13Q15645 432 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 SLC1A5Q15758 541 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CDKN3Q16667 212 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 SIRPB2Q5JXA9 342 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 SPDYCQ5MJ68 293 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 PDSS1Q5T2R2 415 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 LCTLQ6UWM7 567 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 DPPA4Q7L190 304 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 LPCAT2Q7L5N7 544 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 LINC00523Q86TU6 105 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CTAGE6Q86UF2 777 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 NFE4Q86UQ8 179 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 TRIM69Q86WT6 500 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 HORMAD1Q86X24 394 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CACUL1Q86Y37 369 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CTAGE4Q8IX94 777 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 SLC35F3Q8IY50 421 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 SPATA6LQ8N4H0 392 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 MMGT1Q8N4V1 131 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 FRMD1Q8N878 549 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CEP112Q8N8E3 955 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 BBOF1Q8ND07 529 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 MCUQ8NE86 351 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 LPCAT1Q8NF37 534 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 PRSS33Q8NF86 280 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 IPMKQ8NFU5 416 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 HUS1BQ8NHY5 278 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CXorf40AQ8TE69 158 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 PDCD6IPQ8WUM4 868 aaKnown RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 RND1Q92730 232 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 RMDN1Q96DB5 314 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 SMIM14Q96QK8 99 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 MCCC1Q96RQ3 725 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 LYSMD1Q96S90 227 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 TREX2Q9BQ50 279 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 TBL1YQ9BQ87 522 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 FAM110AQ9BQ89 295 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 APOL2Q9BQE5 337 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 FICDQ9BVA6 458 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 CARD6Q9BX69 1037 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 GPR174Q9BXC1 333 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 TDRD1Q9BXT4 1180 aaKnown RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 TRABDQ9H4I3 376 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 LRRC40Q9H9A6 602 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 BRF2Q9HAW0 419 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 HINT3Q9NQE9 182 aaKnown RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 EIF2B3Q9NR50 452 aaKnown RBP3.03□□□□□ -1.92
VPS13B-209ENST00000521559 KLHL1Q9NR64 748 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 HACD3Q9P035 362 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 TINAGQ9UJW2 476 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 PADI1Q9ULC6 663 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 ZNF711Q9Y462 761 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 LOXL2Q9Y4K0 774 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 R4GN57 208 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 ANAPC1Q9H1A4 1944 aa3.03□□□□□ -1.92
VPS13B-209ENST00000521559 COL4A2P08572 1712 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 A0A1W2PQM1 296 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 MAGEB16A2A368 324 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 NPIPB15A6NHN6 443 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-209ENST00000521559 FAM47DPA6NHR8 397 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 SDR42E2A6NKP2 422 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 PRAMEF26H0Y7S4 382 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 DVL1O14640 695 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 DNALI1O14645 258 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-209ENST00000521559 NDC80O14777 642 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 SLC31A1O15431 190 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 TTI1O43156 1089 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 RAD51CO43502 376 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 LATO43561 262 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 DOK2O60496 412 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 RECQL5O94762 991 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-209ENST00000521559 PAK4O96013 591 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-209ENST00000521559 IGHV4-34P06331 123 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 ALPIP09923 528 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 MLNP12872 115 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 GNSP15586 552 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF30P17039 623 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 TPSB2P20231 275 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 EDN2P20800 178 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 S1PR1P21453 382 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 LHCGRP22888 699 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 PSMA3P25788 255 aa3.02□□□□□ -1.93
VPS13B-209ENST00000521559 CD27P26842 260 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms