RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 RMDN1Q96DB5 314 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 GUCD1Q96NT3 240 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 SMIM14Q96QK8 99 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 TRIB3Q96RU7 358 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 CYTH2Q99418 400 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 CMKLR1Q99788 373 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 SH3GL2Q99962 352 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 NAT9Q9BTE0 207 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 TMEM109Q9BVC6 243 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 PHF7Q9BWX1 381 aaPredicted RBP3.71□□□□□ -1.81
CLK4-207ENST00000520909 NUF2Q9BZD4 464 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 ROPN1BQ9BZX4 212 aaPredicted RBP3.71□□□□□ -1.81
CLK4-207ENST00000520909 IL22Q9GZX6 179 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 TFB2MQ9H5Q4 396 aaKnown RBP3.71□□□□□ -1.81
CLK4-207ENST00000520909 EPHX3Q9H6B9 360 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 ZDHHC6Q9H6R6 413 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 ATP13A3Q9H7F0 1226 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 ERVMER34-1Q9H9K5 563 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 ROPN1Q9HAT0 212 aaPredicted RBP3.71□□□□□ -1.81
CLK4-207ENST00000520909 TMBIM4Q9HC24 238 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 PPANQ9NQ55 473 aaKnown RBP3.71□□□□□ -1.81
CLK4-207ENST00000520909 CHRAC1Q9NRG0 131 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 C20orf96Q9NUD7 363 aaPredicted RBP3.71□□□□□ -1.81
CLK4-207ENST00000520909 HS3ST2Q9Y278 367 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 IKBKGQ9Y6K9 419 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 RPS6KL1Q9Y6S9 549 aa3.71□□□□□ -1.81
CLK4-207ENST00000520909 NYNRINQ9P2P1 1898 aaKnown RBP3.71□□□□□ -1.82
CLK4-207ENST00000520909 DOCK8Q8NF50 2099 aa3.71□□□□□ -1.82
CLK4-207ENST00000520909 EDDM13A0A1B0GTR0 161 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 CXorf51AA0A1B0GTR3 108 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 FAM237BA0A1B0GVD1 139 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 TCRBV9S1A1TA0A576 114 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 HEATR9A2RTY3 570 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 C2orf81A6NN90 581 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 ANKRD66B4E2M5 251 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 GOLGA8KD6RF30 607 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 SPECC1L-ADORA2AF8WAN1 911 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 H3BQF6 201 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 CCL22O00626 93 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 POLR3GO15318 223 aaPredicted RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 BUD23O43709 281 aaKnown RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 SYNGR3O43761 229 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 PRKNO60260 465 aaPredicted RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 UGT1A9O60656 530 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 TCEA3O75764 348 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 SORBS2O94875 1100 aaKnown RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 VAPBO95292 243 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 PGLSO95336 258 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 SLC4A1P02730 911 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 UGT2B4P06133 528 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 HLA-EP13747 358 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 AGAP20933 346 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 OAS2P29728 719 aaKnown RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 TNFRSF4P43489 277 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 RPL26P61254 145 aaKnown RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 ZNF234Q14588 700 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 EFTUD2Q15029 972 aaKnown RBP eCLIP3.7□□□□□ -1.82
CLK4-207ENST00000520909 TMED2Q15363 201 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 ZNF239Q16600 458 aaKnown RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 KLHL38Q2WGJ6 581 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 POM121L1PQ3SYA9 428 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 KBTBD12Q3ZCT8 623 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 AGBL2Q5U5Z8 902 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 KCTD16Q68DU8 428 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 LRRC8EQ6NSJ5 796 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 NLRP9Q7RTR0 991 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 CROCCP2Q86T23 111 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 TMEM135Q86UB9 458 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 LRRC6Q86X45 466 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 ZNF440Q8IYI8 595 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 STK40Q8N2I9 435 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 OTUD6BQ8N6M0 293 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 VPS37AQ8NEZ2 397 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 OR2A12Q8NGT7 310 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 GSDMBQ8TAX9 411 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 BRSK1Q8TDC3 778 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 FAM222BQ8WU58 562 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 CDKL2Q92772 493 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 ERLEC1Q96DZ1 483 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 ZNF641Q96N77 438 aaPredicted RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 RANBP9Q96S59 729 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 CD180Q99467 661 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 PAFAH2Q99487 392 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 P2RY13Q9BPV8 354 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 NEURL2Q9BR09 285 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 KIFC1Q9BW19 673 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 TDRD1Q9BXT4 1180 aaKnown RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 GPR63Q9BZJ6 419 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 STMN4Q9H169 189 aaPredicted RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 KCNN2Q9H2S1 579 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 C8orf33Q9H7E9 229 aaPredicted RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 UGT1A7Q9HAW7 530 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 UGT1A10Q9HAW8 530 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 UGT1A8Q9HAW9 530 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 MRM3Q9HC36 420 aaKnown RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 ZDHHC4Q9NPG8 344 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 MED4Q9NPJ6 270 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 IL1RAPL1Q9NZN1 696 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 CTNNAL1Q9UBT7 734 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 SLC2A6Q9UGQ3 507 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms