RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 BMPR2Q13873 1038 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 HIST2H2ACQ16777 129 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 TMEM35AQ53FP2 167 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 PAGE2BQ5JRK9 111 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 HIST2H2AA3Q6FI13 130 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 HSDL2Q6YN16 418 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 ZNF321PQ8N8H1 164 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 ACOT4Q8N9L9 421 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 MORN4Q8NDC4 146 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 SRFBP1Q8NEF9 429 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 OR52N2Q8NGI0 321 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 FAM57AQ8TBR7 257 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 ANKRD9Q96BM1 317 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 LURAP1Q96LR2 239 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 KCNC2Q96PR1 638 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 RASL10BQ96S79 203 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 TBCDQ9BTW9 1192 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 MS4A8Q9BY19 250 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 ROGDIQ9GZN7 287 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 ALG9Q9H6U8 611 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 DEPPQ9NTK1 212 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 GPATCH2Q9NW75 528 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 CD274Q9NZQ7 290 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 TXNDC16Q9P2K2 825 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 CLCA3PQ9Y6N3 262 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 SCN2AQ99250 2005 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 SCN3AQ9NY46 2000 aa8.59□□□□□ -1.03
CTNNA1-221ENST00000520339 A0A0G2JMM0 328 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 A0A1W2PPB8 328 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 A0A1W2PRS3 328 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 A8MVJ9 347 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 KIR3DP1A8MWS1 328 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 WWP2O00308 870 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 RTCAO00442 366 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 CCNT2O60583 730 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 ZNF354AO60765 605 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 PDE9AO76083 593 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 TGFB1P01137 390 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 TPOP07202 933 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 CD3EP07766 207 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 SLC35E2BP0CK96 405 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 MTHFD2P13995 350 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 TNNI3P19429 210 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 POU3F2P20265 443 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 HIST1H1TP22492 207 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 CRABP2P29373 138 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 SPRP35270 261 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 SOX3P41225 446 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 MSH2P43246 934 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 HK2P52789 917 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 PLTPP55058 493 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 VSNL1P62760 191 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 GUCY2DQ02846 1103 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 STX4Q12846 297 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 SERTAD2Q14140 314 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 TRADDQ15628 312 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 PRSS53Q2L4Q9 553 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 KBTBD12Q3ZCT8 623 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 DEPDC1Q5TB30 811 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 MED27Q6P2C8 311 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 ARHGAP11AQ6P4F7 1023 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 ZDHHC24Q6UX98 284 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 IL20RBQ6UXL0 311 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 CMC1Q7Z7K0 106 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 CTAGE3PQ8IX95 158 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 IFT20Q8IY31 132 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 LAS2Q8IYD9 372 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 EID3Q8N140 333 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 MARVELD2Q8N4S9 558 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 PPM1NQ8N819 430 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 PSD4Q8NDX1 1056 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 OR2M7Q8NG81 312 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 OR5L2Q8NGL0 311 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 OR8K3Q8NH51 312 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 OR14A16Q8NHC5 309 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 UBTD2Q8WUN7 234 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 ASB15Q8WXK1 588 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 UBE2E3Q969T4 207 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 SDCCAG3Q96C92 435 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 SGCZQ96LD1 299 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 ATOH8Q96SQ7 321 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 MAPKAP1Q9BPZ7 522 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 TREX2Q9BQ50 279 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 LRRC1Q9BTT6 524 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 BRINP2Q9C0B6 783 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 OR8D2Q9GZM6 311 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 ENKD1Q9H0I2 346 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 DEFB127Q9H1M4 99 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 ZDHHC11Q9H8X9 412 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 COPS7BQ9H9Q2 264 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 NMRAL1Q9HBL8 299 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 HPF1Q9NWY4 346 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 NUDT4Q9NZJ9 180 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 RNF112Q9ULX5 631 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 ERVK-11Q9UQG0 969 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 U3KQE9 123 aa8.58□□□□□ -1.04
CTNNA1-221ENST00000520339 C17orf105B2RV13 164 aa8.57□□□□□ -1.04
CTNNA1-221ENST00000520339 K7EPI3 171 aa8.57□□□□□ -1.04
CTNNA1-221ENST00000520339 UBXN8O00124 270 aa8.57□□□□□ -1.04
CTNNA1-221ENST00000520339 CDC40O60508 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms