RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 CCDC120Q96HB5 630 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 FBXL20Q96IG2 436 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 TMEM237Q96Q45 408 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 DEFB127Q9H1M4 99 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 C12orf65Q9H3J6 166 aaKnown RBP8.64□□□□□ -1.03
HDAC3-215ENST00000519474 ELOVL6Q9H5J4 265 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 ANKZF1Q9H8Y5 726 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 WDR41Q9HAD4 459 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 BRF2Q9HAW0 419 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 PROK2Q9HC23 129 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 SH2D2AQ9NP31 389 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 ASH1LQ9NR48 2969 aaKnown RBP8.64□□□□□ -1.03
HDAC3-215ENST00000519474 VPS29Q9UBQ0 182 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 SNX6Q9UNH7 406 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 ERVK-19Q9WJR5 959 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 TIMM22Q9Y584 194 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 PCDHA9Q9Y5H5 950 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 CROCCQ5TZA2 2017 aa8.64□□□□□ -1.03
HDAC3-215ENST00000519474 A0A1B0GTH9 108 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 SERTM1A2A2V5 107 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 UBFD1O14562 309 aaKnown RBP8.63□□□□□ -1.03
HDAC3-215ENST00000519474 ADAM10O14672 748 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 OR10H2O60403 315 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 ULK1O75385 1050 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 PROCP04070 461 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 NR2F6P10588 404 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 PORP16435 677 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-215ENST00000519474 PIK3R1P27986 724 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 TNFRSF8P28908 595 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 PTGER1P34995 402 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 CRHR1P34998 444 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 DCTP40126 519 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 SLCO1A2P46721 670 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 RAE1P78406 368 aaKnown RBP8.63□□□□□ -1.03
HDAC3-215ENST00000519474 ADORA2A-AS1P86434 159 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 PLIN5Q00G26 463 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 SLC18A2Q05940 514 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 MGAT2Q10469 447 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 FOXO1Q12778 655 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 RASA2Q15283 850 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 SLC22A10Q63ZE4 541 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 FAM111BQ6SJ93 734 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 SCIMPQ6UWF3 145 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 BNC2Q6ZN30 1099 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-215ENST00000519474 RTL4Q6ZR62 310 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 COMMD6Q7Z4G1 85 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 SLC15A4Q8N697 577 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 C1orf52Q8N6N3 182 aaKnown RBP8.63□□□□□ -1.03
HDAC3-215ENST00000519474 ZNF615Q8N8J6 731 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 GOLM1Q8NBJ4 401 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 UBLCP1Q8WVY7 318 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-215ENST00000519474 C11orf24Q96F05 449 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-215ENST00000519474 ART5Q96L15 291 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 SGCZQ96LD1 299 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 DHRS1Q96LJ7 313 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 PHF12Q96QT6 1004 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 ZNF382Q96SR6 550 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 HBEGFQ99075 208 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 PELOQ9BRX2 385 aaKnown RBP8.63□□□□□ -1.03
HDAC3-215ENST00000519474 CNPPD1Q9BV87 410 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 GSTO2Q9H4Y5 243 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 CXorf21Q9HAI6 301 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 PLSCR2Q9NRY7 297 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 NMRK1Q9NWW6 199 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 COPS7AQ9UBW8 275 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 SH3BGRL2Q9UJC5 107 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 TINAGQ9UJW2 476 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 GRID1Q9ULK0 1009 aa8.63□□□□□ -1.03
HDAC3-215ENST00000519474 DIDO1Q9BTC0 2240 aaKnown RBP8.63□□□□□ -1.03
HDAC3-215ENST00000519474 CACNA1DQ01668 2161 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 A0A0G2JMM0 328 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 A0A1W2PPB8 328 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 A0A1W2PRS3 328 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 C1orf226A1L170 272 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 KIR3DP1A8MWS1 328 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 G3V3Y1 287 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 DYRK3O43781 588 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 PLIN3O60664 434 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 GUCY1B2O75343 617 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 GLSO94925 669 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-215ENST00000519474 KRT6AP02538 564 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 KRT6BP04259 564 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 CCL3P10147 92 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 HSD3B1P14060 373 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 CPMP14384 443 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 ENPP1P22413 925 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 HSD3B2P26439 372 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 SERPINB3P29508 390 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 SSTR4P31391 388 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 PIGAP37287 484 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 FEN1P39748 380 aaKnown RBP8.62□□□□□ -1.03
HDAC3-215ENST00000519474 CCT5P48643 541 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 KRT6CP48668 564 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 HTR6P50406 440 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 MAPK12P53778 367 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 NAGLUP54802 743 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 FOXA1P55317 472 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 PKNOX1P55347 436 aa8.62□□□□□ -1.03
HDAC3-215ENST00000519474 PPIAP62937 165 aaKnown RBP8.62□□□□□ -1.03
HDAC3-215ENST00000519474 TRA2BP62995 288 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms