RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 MKL2Q9ULH7 1088 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 A0A0G2JPF8 293 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 TRDV1A0A1B0GX56 115 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 EFCAB7A8K855 629 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 HEPACAM2A8MVW5 462 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 MAGEB17A8MXT2 336 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 HNRNPCL3B7ZW38 293 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 MANBAO00462 879 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 HPP00738 406 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 USP17L7P0C7H9 530 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 HNRNPCL4P0DMR1 293 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 CCR6P51684 374 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 RAG2P55895 527 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 WNT4P56705 351 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 RAB8AP61006 207 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 CHRNA6Q15825 494 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 C9orf57Q5W0N0 161 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 FCRLBQ6BAA4 426 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 ZNF621Q6ZSS3 439 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 IL17RCQ8NAC3 791 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 DMBX1Q8NFW5 382 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 PHOSPHO2Q8TCD6 241 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 TCEAL3Q969E4 200 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 OTULINQ96BN8 352 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 KLHL5Q96PQ7 755 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 SPATA5L1Q9BVQ7 753 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 CACNG6Q9BXT2 260 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 CHIAQ9BZP6 476 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 TMEM39BQ9GZU3 492 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 SPRTNQ9H040 489 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-208ENST00000519004 BEX1Q9HBH7 125 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 SARS2Q9NP81 518 aaKnown RBP12.88□□□□□ -0.35
PABPC1-208ENST00000519004 EXOSC3Q9NQT5 275 aaKnown RBP12.88□□□□□ -0.35
PABPC1-208ENST00000519004 GKN1Q9NS71 199 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 CYSLTR2Q9NS75 346 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 PIPOXQ9P0Z9 390 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 CFAP97Q9P2B7 532 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 MBD2Q9UBB5 411 aa12.88□□□□□ -0.35
PABPC1-208ENST00000519004 RPH3AQ9Y2J0 694 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-208ENST00000519004 TMEM82A0PJX8 343 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 RAB36O95755 333 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 IGFBP1P08833 259 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-208ENST00000519004 PIRTP0C851 137 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 PEPDP12955 493 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 HOXC13P31276 330 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 SLC6A4P31645 630 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 ACSL1P33121 698 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 TMEM88Q6PEY1 159 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 B3GLCTQ6Y288 498 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 MSANTD1Q6ZTZ1 278 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 BHLHA9Q7RTU4 235 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 PLEKHH3Q7Z736 793 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 TRPV1Q8NER1 839 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 CDKN2AIPNLQ96HQ2 116 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 ACPTQ9BZG2 426 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 OSGEPL1Q9H4B0 414 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 NMNAT1Q9HAN9 279 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-208ENST00000519004 ELOVL2Q9NXB9 296 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 NUP214P35658 2090 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-208ENST00000519004 C2orf81A6NN90 581 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 TAPBPO15533 448 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 SUSD5O60279 629 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 HTR3BO95264 441 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 TFP02787 698 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 SPP1P10451 314 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 GABRA1P14867 456 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 SDC1P18827 310 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 VIPR1P32241 457 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 ZXDBP98169 803 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 SLC10A7Q0GE19 358 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 MTAPQ13126 283 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 ZBTB6Q15916 424 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 IFI44LQ53G44 452 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 CTSL3PQ5NE16 218 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 FAM74A1Q5RGS3 127 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 BTN2A1Q7KYR7 527 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 NAXDQ8IW45 347 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-208ENST00000519004 ZFP41Q8N8Y5 198 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 DBF4BQ8NFT6 615 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 OR5M3Q8NGP4 307 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 C2CD4CQ8TF44 421 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 TADA1Q96BN2 335 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 RBM14Q96PK6 669 aaKnown RBP12.87□□□□□ -0.35
PABPC1-208ENST00000519004 YIPF4Q9BSR8 244 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 OR51M1Q9H341 326 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 GAREM1Q9H706 876 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 DDX31Q9H8H2 851 aaKnown RBP12.87□□□□□ -0.35
PABPC1-208ENST00000519004 MYEF2Q9P2K5 600 aaKnown RBP12.87□□□□□ -0.35
PABPC1-208ENST00000519004 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-208ENST00000519004 MRTO4Q9UKD2 239 aaKnown RBP12.87□□□□□ -0.35
PABPC1-208ENST00000519004 DERAQ9Y315 318 aa12.87□□□□□ -0.35
PABPC1-208ENST00000519004 A0A1B0GVC2 190 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 A6NIN4 97 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 OR6C75A6NL08 312 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 CHURC1-FNTBB4DL54 471 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 FAM227AF5H4B4 570 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 SCN2BO60939 215 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 NDUFS3O75489 264 aa12.86□□□□□ -0.35
PABPC1-208ENST00000519004 RP2O75695 350 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms