RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CA13Q8N1Q1 262 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 AMER3Q8N944 861 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ACOT4Q8N9L9 421 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 METTL21AQ8WXB1 218 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TBC1D20Q96BZ9 403 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SLC45A3Q96JT2 553 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 QRFPRQ96P65 431 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 KCNC2Q96PR1 638 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SERINC2Q96SA4 455 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ARPC5LQ9BPX5 153 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CRB3Q9BUF7 120 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 NPLQ9BXD5 320 aaPredicted RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SLC29A3Q9BZD2 475 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ROGDIQ9GZN7 287 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ILKAPQ9H0C8 392 aaPredicted RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 POFUT1Q9H488 388 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ACTL8Q9H568 366 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MANSC1Q9H8J5 431 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 BRF2Q9HAW0 419 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CLK4Q9HAZ1 481 aaKnown RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CPNE5Q9HCH3 593 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MKKSQ9NPJ1 570 aaPredicted RBP5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 VPS29Q9UBQ0 182 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CTSFQ9UBX1 484 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ZDHHC2Q9UIJ5 367 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C3orf18Q9UK00 162 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FBXW2Q9UKT8 454 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SPACA6W5XKT8 324 aa5.46□□□□□ -1.54
SCARNA6.1-201ENST00000516989 IGLV3-12A0A075B6K2 115 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TCRBV5S2A0A599 114 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 VSTM2BA6NLU5 285 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TMEM233B4DJY2 109 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C4orf51C9J302 202 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FAM227AF5H4B4 570 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ACOT7O00154 380 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SLC28A1O00337 649 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PEX12O00623 359 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CLDN4O14493 209 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PLPP1O14494 284 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 DYNC1I1O14576 645 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RGS14O43566 566 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CNOT3O75175 753 aaKnown RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ALOX12BO75342 701 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MYO1DO94832 1006 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SEMA3DO95025 777 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 BMP10O95393 424 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 IGHEP01854 428 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 GBAP04062 536 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FHP07954 510 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 LINC00032P0C843 101 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 GLI4P10075 376 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CD8BP10966 210 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RNH1P13489 461 aaKnown RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 HSD3B1P14060 373 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 NR1D1P20393 614 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 HIST1H1TP22492 207 aaPredicted RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TLX1P31314 330 aaPredicted RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ARRB2P32121 409 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RPL14P50914 215 aaKnown RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 LIM2P55344 173 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 HMGCS1Q01581 520 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 KLC1Q07866 573 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ACTN3Q08043 901 aaPredicted RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 GALNT1Q10472 559 aaPredicted RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 BST1Q10588 318 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 DEFB109BQ30KR1 87 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SPDYAQ5MJ70 313 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CCNYL2Q5T2Q4 361 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ATP1A1-AS1Q5TC04 95 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ZNF793Q6ZN11 406 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ATG14Q6ZNE5 492 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PAGE2Q7Z2X7 111 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 NUDT13Q86X67 352 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RAB43Q86YS6 212 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 DDIASQ8IXT1 998 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 METTL4Q8N3J2 472 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ZNF781Q8N8C0 355 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 GBP7Q8N8V2 638 aaPredicted RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 OR2Y1Q8NGV0 311 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 OR6Y1Q8NGX8 325 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 LRRC8CQ8TDW0 803 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ASB15Q8WXK1 588 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ZNF75CPQ92670 426 aaPredicted RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FKBP10Q96AY3 582 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 APIPQ96GX9 242 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MAPKAP1Q9BPZ7 522 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MRPL1Q9BYD6 325 aaKnown RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ACPTQ9BZG2 426 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C20orf27Q9GZN8 174 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SLC26A1Q9H2B4 701 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 WDR54Q9H977 334 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TNFRSF12AQ9NP84 129 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PFDN4Q9NQP4 134 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PRTFDC1Q9NRG1 225 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 INTS9Q9NV88 658 aaKnown RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PNPOQ9NVS9 261 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 THAP1Q9NVV9 213 aa5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 NXT1Q9UKK6 140 aaKnown RBP5.45□□□□□ -1.54
SCARNA6.1-201ENST00000516989 DAPP1Q9UN19 280 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms