RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SYNGR4O95473 234 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 SLC4A1P02730 911 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 MELTFP08582 738 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 MBL2P11226 248 aaPredicted RBP4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 BCL3P20749 454 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 MAT2AP31153 395 aaKnown RBP4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 NDST1P52848 882 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 EMC2Q15006 297 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 ZNF528Q3MIS6 628 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 CMPK2Q5EBM0 449 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 HERC4Q5GLZ8 1057 aaPredicted RBP4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 HIST2H2AA3Q6FI13 130 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 RAB12Q6IQ22 244 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 GPR142Q7Z601 462 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 ADGRD2Q7Z7M1 963 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 SAMD12Q8N8I0 201 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 RDH11Q8TC12 318 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 TMEM237Q96Q45 408 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 ACCSQ96QU6 501 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 RUFY1Q96T51 708 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 DDX47Q9H0S4 455 aaKnown RBP4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 SP140LQ9H930 580 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 Q9HAA7 133 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 IL1RL2Q9HB29 575 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 TAS2R16Q9NYV7 291 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 VPS54Q9P1Q0 977 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 EIF3KQ9UBQ5 218 aaKnown RBP4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 DNPEPQ9ULA0 475 aa4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 RPH3AQ9Y2J0 694 aaPredicted RBP4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 COL5A2P05997 1499 aaPredicted RBP4.05□□□□□ -1.76
HMGCS1-207ENST00000514610 FAM205AQ6ZU69 1335 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 CYSRT1A8MQ03 144 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 PHF1O43189 567 aaPredicted RBP4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 OAS1P00973 400 aaKnown RBP4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 CXCL10P02778 98 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 ZCCHC18P0CG32 403 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 SPRP35270 261 aaPredicted RBP4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 PGFP49763 221 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 ZNF131P52739 623 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 DSCR10P59022 87 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 STARD6P59095 220 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 CLPPQ16740 277 aaPredicted RBP4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 ZNF506Q5JVG8 444 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 AGAP7PQ5VUJ5 663 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 TATDN1Q6P1N9 297 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 BATF2Q8N1L9 274 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 ARL10Q8N8L6 244 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 FLVCR1-AS1Q8TAF5 88 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 FBXO25Q8TCJ0 367 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 SLC13A3Q8WWT9 602 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 ST6GALNAC5Q9BVH7 336 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 PUS3Q9BZE2 481 aaKnown RBP4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 XPO4Q9C0E2 1151 aaKnown RBP4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 MOSPD1Q9UJG1 213 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 IKZF3Q9UKT9 509 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 PTPRUQ92729 1446 aa4.04□□□□□ -1.76
HMGCS1-207ENST00000514610 GON4LQ3T8J9 2241 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 RNF212BA8MTL3 300 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 HTATSF1O43719 755 aaKnown RBP4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 MT-ND1P03886 318 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ALPPP05187 535 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ALPPL2P10696 532 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 STMN1P16949 149 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ACP1P24666 158 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 PTPN4P29074 926 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 NPY2RP49146 381 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 CDKL1Q00532 357 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 C17orf58Q2M2W7 97 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 HKDC1Q2TB90 917 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 TCHHL1Q5QJ38 904 aaPredicted RBP4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 WDR88Q6ZMY6 472 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ASRGL1Q7L266 308 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 FGFRL1Q8N441 504 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ITLN1Q8WWA0 313 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ANKRD9Q96BM1 317 aaPredicted RBP4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 RAB3CQ96E17 227 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 COQ7Q99807 217 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ABCG8Q9H221 673 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 DCTPP1Q9H773 170 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ERVK-18Q9QC07 812 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 KCNN3Q9UGI6 736 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ENTPD4Q9Y227 616 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ATG4BQ9Y4P1 393 aa4.03□□□□□ -1.76
HMGCS1-207ENST00000514610 ZMYM6O95789 1325 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 FOXI3A8MTJ6 420 aaPredicted RBP4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 ADAM12O43184 909 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 PGK2P07205 417 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 FCGR3AP08637 254 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 HIST1H2AGP0C0S8 130 aaPredicted RBP4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 AKT2P31751 481 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 SFNP31947 248 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 PDK1Q15118 436 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 ZKSCAN8Q15776 578 aaPredicted RBP4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 HAGHQ16775 308 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 ANKRD55Q3KP44 614 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 NHLRC3Q5JS37 347 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 DDI2Q5TDH0 399 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 LIPKQ5VXJ0 399 aa4.02□□□□□ -1.77
HMGCS1-207ENST00000514610 ARMCX5Q6P1M9 558 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms