RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 MECRQ9BV79 373 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 LIN28AQ9H9Z2 209 aaKnown RBP8.99□□□□□ -0.97
RNF4-221ENST00000513643 DEPPQ9NTK1 212 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 EHD3Q9NZN3 535 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 DLGAP4Q9Y2H0 992 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 DNAJC15Q9Y5T4 150 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 ADGRG4Q8IZF6 3080 aa8.99□□□□□ -0.97
RNF4-221ENST00000513643 MAST4O15021 2626 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 ARHGAP10A1A4S6 786 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 WWP2O00308 870 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 AZIN1O14977 448 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 PCDH7O60245 1069 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 CHRNGP07510 517 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 RNF224P0DH78 156 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 CSNK2A2P19784 350 aaPredicted RBP8.98□□□□□ -0.97
RNF4-221ENST00000513643 PIK3R1P27986 724 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 SOX3P41225 446 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 ERVK-8P63133 956 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 PMP22Q01453 160 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 OC90Q02509 493 aaPredicted RBP8.98□□□□□ -0.97
RNF4-221ENST00000513643 ACSM2AQ08AH3 577 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 ZNF267Q14586 743 aaPredicted RBP8.98□□□□□ -0.97
RNF4-221ENST00000513643 KRT71Q3SY84 523 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 XKR7Q5GH72 579 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 ACSM2BQ68CK6 577 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 CLEC6AQ6EIG7 209 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 FAM71E1Q6IPT2 247 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.98□□□□□ -0.97
RNF4-221ENST00000513643 SULF2Q8IWU5 870 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 GALNT12Q8IXK2 581 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 CLYBLQ8N0X4 340 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 GOLM1Q8NBJ4 401 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 POGLUT1Q8NBL1 392 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 OR7G1Q8NGA0 311 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 OR2T11Q8NH01 316 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 ZNF675Q8TD23 568 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 RELTQ969Z4 430 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 TP53INP1Q96A56 240 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 ZNF764Q96H86 408 aaPredicted RBP8.98□□□□□ -0.97
RNF4-221ENST00000513643 SGCZQ96LD1 299 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 FAIM2Q9BWQ8 316 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 SHCBP1LQ9BZQ2 653 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 WWTR1Q9GZV5 400 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 PROK2Q9HC23 129 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 PLSCR2Q9NRY7 297 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 MAT2BQ9NZL9 334 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 COPS7AQ9UBW8 275 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 ERVK-19Q9WJR5 959 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 ZNF835Q9Y2P0 537 aa8.98□□□□□ -0.97
RNF4-221ENST00000513643 DIDO1Q9BTC0 2240 aaKnown RBP8.98□□□□□ -0.97
RNF4-221ENST00000513643 CELSR2Q9HCU4 2923 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 MYO1GB0I1T2 1018 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 LSM1O15116 133 aaKnown RBP8.97□□□□□ -0.97
RNF4-221ENST00000513643 BIRC5O15392 142 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 RGS16O15492 202 aaPredicted RBP8.97□□□□□ -0.97
RNF4-221ENST00000513643 CTIFO43310 598 aaKnown RBP8.97□□□□□ -0.97
RNF4-221ENST00000513643 DYRK3O43781 588 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 OR10H2O60403 315 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 TBX19O60806 448 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 GLSO94925 669 aaPredicted RBP8.97□□□□□ -0.97
RNF4-221ENST00000513643 CBX7O95931 251 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 LDLRP01130 860 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 IL3P08700 152 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 ANXA4P09525 319 aaPredicted RBP8.97□□□□□ -0.97
RNF4-221ENST00000513643 FBXO45P0C2W1 286 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 DDCP20711 480 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 TACR1P25103 407 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 SSTR4P31391 388 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 SERPINB4P48594 390 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 SLC18A1P54219 525 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 FOXO1Q12778 655 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 ASPHQ12797 758 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 HEPACAMQ14CZ8 416 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 HYAL4Q2M3T9 481 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 KRTCAP3Q53RY4 240 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 ZNF628Q5EBL2 1059 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 FHL5Q5TD97 284 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 NOXRED1Q6NXP6 359 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 FAM111BQ6SJ93 734 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 OPN5Q6U736 354 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 BNC2Q6ZN30 1099 aaPredicted RBP8.97□□□□□ -0.97
RNF4-221ENST00000513643 Q6ZPB1 254 aaPredicted RBP8.97□□□□□ -0.97
RNF4-221ENST00000513643 FGD2Q7Z6J4 655 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 CROCCP2Q86T23 111 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 CYP4Z2PQ8N1L4 340 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 TMEM156Q8N614 296 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 CCDC63Q8NA47 563 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 PSD4Q8NDX1 1056 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 SIMC1Q8NDZ2 872 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 DOK4Q8TEW6 326 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 PAQR8Q8TEZ7 354 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 ERP27Q96DN0 273 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 C5orf34Q96MH7 638 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 GPR137Q96N19 417 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 IQCGQ9H095 443 aaKnown RBP8.97□□□□□ -0.97
RNF4-221ENST00000513643 MYNNQ9NPC7 610 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 RRAGDQ9NQL2 400 aaPredicted RBP8.97□□□□□ -0.97
RNF4-221ENST00000513643 KLHL1Q9NR64 748 aa8.97□□□□□ -0.97
RNF4-221ENST00000513643 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.97□□□□□ -0.97
RNF4-221ENST00000513643 ERRFI1Q9UJM3 462 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms