RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CLCA1A8K7I4 914 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 POC1B-GALNT4F8VUJ3 575 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 QSOX1O00391 747 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 LIN7AO14910 233 aaPredicted RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 TFECO14948 347 aaPredicted RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SPRY1O43609 319 aaPredicted RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 UGT1A9O60656 530 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 DNAJB6O75190 326 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SLC25A12O75746 678 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 AP2A1O95782 977 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 NDST3O95803 873 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 CCDC172P0C7W6 258 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 FAM157CP0CG43 387 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 C8orf89P0DMQ9 161 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 T-ENOLP0DO92 83 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 ATP1B2P14415 290 aaPredicted RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 GABRA1P14867 456 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 UGT1A6P19224 532 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 MAGP20916 626 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 UQCRC1P31930 480 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 MTIF2P46199 727 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 STT3AP46977 705 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 PRIM2P49643 509 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 PRLHRP49683 370 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 AGTR2P50052 363 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 ASCL1P50553 236 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 TAS2R50P59544 299 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SORDQ00796 357 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 OGDHQ02218 1023 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 EEF1A2Q05639 463 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 PPIDQ08752 370 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 PRKG2Q13237 762 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 MAMLD1Q13495 774 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 FASTKQ14296 549 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SLC29A2Q14542 456 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 MESDQ14696 234 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 PAFAH1B3Q15102 231 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SF3B4Q15427 424 aaKnown RBP eCLIP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 HYAL4Q2M3T9 481 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 BTBD16Q32M84 506 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 CHRFAM7AQ494W8 412 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 PLA1AQ53H76 456 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 RBM20Q5T481 1227 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 CCDC183Q5T5S1 534 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 KCTD11Q693B1 232 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 ISM2Q6H9L7 571 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 BHLHB9Q6PI77 547 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 UNC5DQ6UXZ4 953 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 ZNF813Q6ZN06 617 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 KIAA0408Q6ZU52 694 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 CYP4V2Q6ZWL3 525 aaPredicted RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 RNF44Q7L0R7 432 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 CPEB2Q7Z5Q1 589 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 NT5DC3Q86UY8 548 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 CRLF3Q8IUI8 442 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 TMTC1Q8IUR5 882 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 CREBRFQ8IUR6 639 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 LIX1LQ8IVB5 337 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 MCOLN2Q8IZK6 566 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 GALNT4Q8N4A0 578 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 OR5K2Q8NHB8 316 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 TADA1Q96BN2 335 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 FAF2Q96CS3 445 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 IMP4Q96G21 291 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 DCUN1D1Q96GG9 259 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SNX22Q96L94 193 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 CCDC138Q96M89 665 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 DACH2Q96NX9 599 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 PEBP4Q96S96 227 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SH3GL2Q99962 352 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SELENOSQ9BQE4 189 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 HES7Q9BYE0 225 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SLC25A51Q9H1U9 297 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 GOLPH3LQ9H4A5 285 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 COG4Q9H9E3 785 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 UGT1A7Q9HAW7 530 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 UGT1A10Q9HAW8 530 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 UGT1A8Q9HAW9 530 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 KCNK13Q9HB14 408 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 MRPL47Q9HD33 250 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 BPIFA1Q9NP55 256 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SPHK1Q9NYA1 384 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 TRPC4Q9UBN4 977 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 MTRF1LQ9UGC7 380 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 MAN1B1Q9UKM7 699 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 CORO2BQ9UQ03 480 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 KLF13Q9Y2Y9 288 aaPredicted RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 PKP3Q9Y446 797 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 KLK4Q9Y5K2 254 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 SNRNP200O75643 2136 aaKnown RBP3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 ARHGAP21Q5T5U3 1957 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 ZNF407Q9C0G0 2248 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 A0A1B0GVC2 190 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 GOLGA6L4A6NEF3 574 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 MBD3L5A6NJ08 208 aaPredicted RBP3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 GABRR3A8MPY1 467 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 NPIPA2E9PIF3 369 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 NPIPA3F8WFD2 350 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 H0YIG0 161 aa3.37□□□□□ -1.87
PDLIM5-218ENST00000513341 TXNDC9O14530 226 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms