RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 ALDOAP04075 364 aaKnown RBP6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 TNNT1P13805 278 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 PSMB1P20618 241 aaKnown RBP6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 FMO4P31512 558 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 NR4A2P43354 598 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 RPP38P78345 283 aaKnown RBP6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 CDH17Q12864 832 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 SCGB2A2Q13296 93 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 EFTUD2Q15029 972 aaKnown RBP eCLIP6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 NFKBIBQ15653 356 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 AAGABQ6PD74 315 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 AGTRAPQ6RW13 159 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 ANGPTL8Q6UXH0 198 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 ZNF793Q6ZN11 406 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 USP43Q70EL4 1123 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 TAGAPQ8N103 731 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 PRELID2Q8N945 189 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 SNX31Q8N9S9 440 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 ANKRD53Q8N9V6 530 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 ACTL9Q8TC94 416 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 LPGAT1Q92604 370 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 HTRA1Q92743 480 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 SENP5Q96HI0 755 aaPredicted RBP6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 FAR2Q96K12 515 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 GAL3ST4Q96RP7 486 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 SOX7Q9BT81 388 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 PACSIN1Q9BY11 444 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 WWTR1Q9GZV5 400 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 METTL17Q9H7H0 456 aaPredicted RBP6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 PLSCR4Q9NRQ2 329 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 CBLN4Q9NTU7 201 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 MED29Q9NX70 200 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 PCDHB10Q9UN67 800 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 TCAF1Q9Y4C2 921 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 SNX8Q9Y5X2 465 aa6.9□□□□□ -1.31
DEPDC1B-205ENST00000512078 PSTPIP1O43586 416 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 B3GALT2O43825 422 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 LDB3O75112 727 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 GAS8O95995 478 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 SERPING1P05155 500 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 RHOXF2BP0C7M4 288 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 COX7A2P14406 83 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 ZNF23P17027 643 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 PTNP21246 168 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 DEKP35659 375 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 SLC1A1P43005 524 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 TMED10P49755 219 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 CLCN7P51798 805 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 EFNA4P52798 201 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 LIM2P55344 173 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 REEP5Q00765 189 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 BSPH1Q075Z2 132 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 FOXL1Q12952 345 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 NAE1Q13564 534 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 RCN2Q14257 317 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 EBPQ15125 230 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 BCL2A1Q16548 175 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 TTLL9Q3SXZ7 439 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 TMEM81Q6P7N7 255 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 CYHR1Q6ZMK1 362 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 UBE2R2Q712K3 238 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 CHMP1BQ7LBR1 199 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 SLC29A4Q7RTT9 530 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 ATG4DQ86TL0 474 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 C7orf57Q8NEG2 295 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 OR6K3Q8NGY3 331 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 C3orf49Q96BT1 292 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 ALKBH8Q96BT7 664 aaKnown RBP6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 FBXL20Q96IG2 436 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 BTBD9Q96Q07 612 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 JMJD8Q96S16 334 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 PIMREGQ9BSJ6 248 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 ACTR8Q9H981 624 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 ARL15Q9NXU5 204 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 DAPP1Q9UN19 280 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 ZNF175Q9Y473 711 aa6.89□□□□□ -1.31
DEPDC1B-205ENST00000512078 A0A0G2JN53 185 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 DPRXA6NFQ7 191 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 SHISA9B4DS77 424 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 E5RI56 91 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 HRKO00198 91 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 SMAD9O15198 467 aaKnown RBP6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 ZNF189O75820 626 aaPredicted RBP6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 CBR3O75828 277 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 MBD3O95983 291 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 ENO3P13929 434 aaPredicted RBP6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 ADH6P28332 368 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 TTKP33981 857 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 STT3AP46977 705 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 PDLIM4P50479 330 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 CDH11P55287 796 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 C21orf58P58505 322 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 EIF3EP60228 445 aaKnown RBP6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 STXBP1P61764 594 aaKnown RBP6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 IGLV3-21P80748 117 aaPredicted RBP6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 GPS1Q13098 491 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 ALKBH2Q6NS38 261 aa6.88□□□□□ -1.31
DEPDC1B-205ENST00000512078 DARS2Q6PI48 645 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms