RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 DNAJB9Q9UBS3 223 aa14.29□□□□□ -0.12
SCLT1-209ENST00000511426 LIPT1Q9Y234 373 aa14.29□□□□□ -0.12
SCLT1-209ENST00000511426 DTNAQ9Y4J8 743 aa14.29□□□□□ -0.12
SCLT1-209ENST00000511426 MMACHCQ9Y4U1 282 aa14.29□□□□□ -0.12
SCLT1-209ENST00000511426 KMT2EQ8IZD2 1858 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 WASHC1A8K0Z3 465 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 HMGN4O00479 90 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 DSCR3O14972 297 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 CLOCKO15516 846 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 SUV39H1O43463 412 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 FGF17O60258 216 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 NUDT7P0C024 238 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 TFPTP0C1Z6 253 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 C8orf89P0DMQ9 161 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 SEPHS1P49903 392 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 ZNF628Q5EBL2 1059 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 TMEM107Q6UX40 140 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 IZUMO2Q6UXV1 221 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 PIWIL3Q7Z3Z3 882 aaKnown RBP14.28□□□□□ -0.12
SCLT1-209ENST00000511426 ST13P4Q8IZP2 240 aaPredicted RBP14.28□□□□□ -0.12
SCLT1-209ENST00000511426 HORMAD2Q8N7B1 307 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 NUP43Q8NFH3 380 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 MMABQ96EY8 250 aaPredicted RBP14.28□□□□□ -0.12
SCLT1-209ENST00000511426 DOHHQ9BU89 302 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 SPATA5L1Q9BVQ7 753 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 BTBD2Q9BX70 525 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 OSBPL10Q9BXB5 764 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 ACTRT3Q9BYD9 372 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 BCL2L10Q9HD36 194 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 GIN1Q9NXP7 522 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 TMEM9Q9P0T7 183 aa14.28□□□□□ -0.12
SCLT1-209ENST00000511426 COL5A1P20908 1838 aaPredicted RBP14.27□□□□□ -0.12
SCLT1-209ENST00000511426 PRR33A8MZF0 331 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 NTN3O00634 580 aaPredicted RBP14.27□□□□□ -0.12
SCLT1-209ENST00000511426 B4GALT2O60909 372 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 COQ9O75208 318 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 C1QCP02747 245 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 SEMG1P04279 462 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 HMGN2P05204 90 aaKnown RBP14.27□□□□□ -0.12
SCLT1-209ENST00000511426 CKMT2P17540 419 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 ACP1P24666 158 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 MC3RP41968 323 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 CRISP3P54108 245 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 SELENOWP63302 87 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 CCL7P80098 99 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 DUSP2Q05923 314 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 DSG2Q14126 1118 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 HMBOX1Q6NT76 420 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 ENPP6Q6UWR7 440 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 KRT73Q86Y46 540 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 ARMC8Q8IUR7 673 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 ICA1LQ8NDH6 482 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 NFKBIDQ8NI38 313 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 BBS10Q8TAM1 723 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 MAL2Q969L2 176 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 ZNF607Q96SK3 696 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 SPRTNQ9H040 489 aaPredicted RBP14.27□□□□□ -0.12
SCLT1-209ENST00000511426 OR51I1Q9H343 314 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 PRTFDC1Q9NRG1 225 aa14.27□□□□□ -0.12
SCLT1-209ENST00000511426 C19orf53Q9UNZ5 99 aaPredicted RBP14.27□□□□□ -0.12
SCLT1-209ENST00000511426 KNL1Q8NG31 2342 aa14.27□□□□□ -0.13
SCLT1-209ENST00000511426 A0A1B0GX78 115 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 UPK1AO00322 258 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ZNF682O95780 498 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 CTSBP07858 339 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 HBQ1P09105 142 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ETS2P15036 469 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 FOLR1P15328 257 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ATP6V1C1P21283 382 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 MAP4K2Q12851 820 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 GK3PQ14409 553 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 LASP1Q14847 261 aaKnown RBP14.26□□□□□ -0.13
SCLT1-209ENST00000511426 GPR19Q15760 415 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 CYBRD1Q53TN4 286 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 SNAP47Q5SQN1 464 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ATAD3BQ5T9A4 648 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 LPCAT4Q643R3 524 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 PPP4R4Q6NUP7 873 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 CDC73Q6P1J9 531 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 TNFAIP8L2Q6P589 184 aaPredicted RBP14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ZNF574Q6ZN55 896 aaPredicted RBP14.26□□□□□ -0.13
SCLT1-209ENST00000511426 SZRD1Q7Z422 152 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 OR51Q1Q8NH59 317 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 OR1L3Q8NH93 324 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 SLC38A5Q8WUX1 472 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 FKBP10Q96AY3 582 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ANKRD9Q96BM1 317 aaPredicted RBP14.26□□□□□ -0.13
SCLT1-209ENST00000511426 CTHRC1Q96CG8 243 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 GFM1Q96RP9 751 aaKnown RBP14.26□□□□□ -0.13
SCLT1-209ENST00000511426 EXD2Q9NVH0 621 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 BAG5Q9UL15 447 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 PADI2Q9Y2J8 665 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 LRCH1Q9Y2L9 728 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 PCDHGB3Q9Y5G1 929 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 PI4KAP42356 2102 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 ZDBF2Q9HCK1 2354 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 IGHV5-10-1A0A0J9YXX1 117 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 TTC36A6NLP5 189 aa14.26□□□□□ -0.13
SCLT1-209ENST00000511426 TPST1O60507 370 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms