RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SPRED3Q2MJR0 410 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 PRICKLE4Q2TBC4 344 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 TRMT12Q53H54 448 aaKnown RBP12.56□□□□□ -0.4
SNF8-206ENST00000509989 ACSM2BQ68CK6 577 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 SLC25A25Q6KCM7 469 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 ANKRD26P1Q6NSI1 321 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 GALNT18Q6P9A2 607 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 LRIG3Q6UXM1 1119 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 ZNF615Q8N8J6 731 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 GFM2Q969S9 779 aaKnown RBP12.56□□□□□ -0.4
SNF8-206ENST00000509989 SLX1AQ9BQ83 275 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 MAT2BQ9NZL9 334 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 MID2Q9UJV3 735 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 VPS4AQ9UN37 437 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 TRAF6Q9Y4K3 522 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 LRRK2Q5S007 2527 aa12.56□□□□□ -0.4
SNF8-206ENST00000509989 PTPN13Q12923 2485 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 ATP6AP2A0A1C7CYW4 349 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 CCDC151A5D8V7 595 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 NME2P1O60361 137 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 ATP6AP2O75787 350 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 RASAL1O95294 804 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 PORP16435 677 aaPredicted RBP12.55□□□□□ -0.4
SNF8-206ENST00000509989 NT5EP21589 574 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 BGNP21810 368 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 NME2P22392 152 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 SSR4P51571 173 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 C2orf80Q0P641 193 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 EBPQ15125 230 aaKnown RBP12.55□□□□□ -0.4
SNF8-206ENST00000509989 CHI3L2Q15782 390 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 IMPG1Q17R60 797 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 RFTN2Q52LD8 501 aaPredicted RBP12.55□□□□□ -0.4
SNF8-206ENST00000509989 SH2D4BQ5SQS7 431 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 FAM71E1Q6IPT2 247 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 NOXRED1Q6NXP6 359 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 ATCAYQ86WG3 371 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 NUDCD3Q8IVD9 361 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 SULF2Q8IWU5 870 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 CYP4Z2PQ8N1L4 340 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 TMEM156Q8N614 296 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 ANKRD42Q8N9B4 389 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 CLHC1Q8NHS4 586 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 SUN3Q8TAQ9 357 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 PRR7Q8TB68 274 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 TWIST2Q8WVJ9 160 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 KAT2AQ92830 837 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 ARL8AQ96BM9 186 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 PGM2Q96G03 612 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 FRMD6Q96NE9 622 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 GAL3ST4Q96RP7 486 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 SORT1Q99523 831 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 TMBIM4Q9HC24 238 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 KCNK9Q9NPC2 374 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 OLAHQ9NV23 265 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 SIRT5Q9NXA8 310 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 BAIAP2L1Q9UHR4 511 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 UTS2RQ9UKP6 389 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 YARS2Q9Y2Z4 477 aaKnown RBP12.55□□□□□ -0.4
SNF8-206ENST00000509989 DNAJC13O75165 2243 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 PCNX3Q9H6A9 2034 aa12.55□□□□□ -0.4
SNF8-206ENST00000509989 ICE1Q9Y2F5 2266 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 HECTD1Q9ULT8 2610 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 ANKUB1A6NFN9 424 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 FCHO1O14526 889 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 SEC22BO75396 215 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 SKAP2O75563 359 aaPredicted RBP12.54□□□□□ -0.4
SNF8-206ENST00000509989 RSL1D1O76021 490 aaKnown RBP12.54□□□□□ -0.4
SNF8-206ENST00000509989 CBX7O95931 251 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 FGF4P08620 206 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 CCL3P10147 92 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 COX7A2P14406 83 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 PCSK2P16519 638 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 TRA2BP62995 288 aaKnown RBP12.54□□□□□ -0.4
SNF8-206ENST00000509989 HSF1Q00613 529 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 FUT7Q11130 342 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 NNATQ16517 81 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 MPEG1Q2M385 716 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 ZNF385BQ569K4 471 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 SPIN4Q56A73 249 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 PIGGQ5H8A4 983 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 FAM180AQ6UWF9 173 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 RNF111Q6ZNA4 994 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 GALNT12Q8IXK2 581 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 CCDC116Q8IYX3 515 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 PRR22Q8IZ63 422 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 CNPY4Q8N129 248 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 ZNF781Q8N8C0 355 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 ZNF441Q8N8Z8 693 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 OR9A2Q8NGT5 310 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 NR4A3Q92570 626 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 TLCD1Q96CP7 247 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 PPP1R36Q96LQ0 422 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 BRINP2Q9C0B6 783 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 WWTR1Q9GZV5 400 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 LRTM1Q9HBL6 345 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 SSU72Q9NP77 194 aaKnown RBP12.54□□□□□ -0.4
SNF8-206ENST00000509989 NMRK1Q9NWW6 199 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 ABI3Q9P2A4 366 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 ZNF639Q9UID6 485 aa12.54□□□□□ -0.4
SNF8-206ENST00000509989 SETXQ7Z333 2677 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms