RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 PYROXD2Q8N2H3 581 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 CLDN22Q8N7P3 220 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 AVL9Q8NBF6 648 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 IPMKQ8NFU5 416 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 OR8J1Q8NGP2 316 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 OR9I1Q8NGQ6 314 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 GNPDA2Q8TDQ7 276 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 GIMAP1Q8WWP7 306 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ASB11Q8WXH4 323 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 RPL3LQ92901 407 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 EXTL1Q92935 676 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 FAM46BQ96A09 425 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 EXOSC8Q96B26 276 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 PPCDCQ96CD2 204 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 LRRC46Q96FV0 321 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TSSK2Q96PF2 358 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 IL4I1Q96RQ9 567 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 RANBP9Q96S59 729 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 CMSS1Q9BQ75 279 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 PINK1Q9BXM7 581 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 NMUR2Q9GZQ4 415 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 SHARPINQ9H0F6 387 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 PLEKHA3Q9HB20 300 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ZDHHC4Q9NPG8 344 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 EQTNQ9NQ60 294 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 CCM2LQ9NUG4 571 aaPredicted RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 TMLHEQ9NVH6 421 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 SLC22A14Q9Y267 594 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 MRPS28Q9Y2Q9 187 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 ACTL7AQ9Y615 435 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ZNF831Q5JPB2 1677 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 B4DEV8 164 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 E5RGE8 158 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 PRRG1O14668 218 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 PIP5K1BO14986 540 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 GSRP00390 522 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 CD63P08962 238 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 NAT2P11245 290 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ITGA6P23229 1130 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ATP5A1P25705 553 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 XKP51811 444 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TAS2R46P59540 309 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 POLR2LP62875 67 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 PDZK1IP1Q13113 114 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ASAH1Q13510 395 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 NKX1-1Q15270 411 aaPredicted RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 PCSK7Q16549 785 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TSTQ16762 297 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 MEP1BQ16820 701 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ADGRF1Q5T601 910 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 KIAA0930Q6ICG6 404 aaPredicted RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 CXorf57Q6NSI4 855 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 STEAP1BQ6NZ63 245 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 WASH2PQ6VEQ5 465 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 WDR88Q6ZMY6 472 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 GCNT7Q6ZNI0 430 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TMPRSS11FQ6ZWK6 438 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 LDB1Q86U70 411 aaPredicted RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 OR4N5Q8IXE1 308 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 SIGLECL1Q8N7X8 197 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 NIPA2Q8N8Q9 360 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 OR1J1Q8NGS3 322 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 OR51A7Q8NH64 312 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 M1APQ8TC57 530 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 NEK7Q8TDX7 302 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 CXorf40AQ8TE69 158 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 FRZBQ92765 325 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 PMEPA1Q969W9 287 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 PNPLA2Q96AD5 504 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TMEM159Q96B96 161 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 MSI2Q96DH6 328 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 SCMH1Q96GD3 660 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 LMLNQ96KR4 655 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 OR5B2Q96R09 309 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ZNF587Q96SQ5 575 aaPredicted RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 BARD1Q99728 777 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 SLC35A5Q9BS91 424 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 CRB3Q9BUF7 120 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TKTL2Q9H0I9 626 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 GAL3ST2Q9H3Q3 398 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ZCCHC4Q9H5U6 513 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 PARD6AQ9NPB6 346 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 FEM1BQ9UK73 627 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 POU2F3Q9UKI9 436 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 DICER1Q9UPY3 1922 aaKnown RBP3.43□□□□□ -1.86
USP53-205ENST00000509769 TEX50A0A1B0GTY4 177 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 J3QRK9 145 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 SLC31A1O15431 190 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 LIASO43766 372 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 OR2T1O43869 369 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 TBL1XO60907 577 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 MED6O75586 246 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ITGAMP11215 1152 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 BMP3P12645 472 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 ZNF823P16415 610 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 FECHP22830 423 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 SLC6A6P31641 620 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 SOX18P35713 384 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 WASP42768 502 aa3.43□□□□□ -1.86
USP53-205ENST00000509769 HNRNPKP61978 463 aaKnown RBP eCLIP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms