RNA–Protein interactions for RNA: ENST00000509351.5

VNN3-211, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-211ENST00000509351 HIST1H2AGP0C0S8 130 aaPredicted RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 CCDC172P0C7W6 258 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 BMP7P18075 431 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 PRKACBP22694 351 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 NMT1P30419 496 aaKnown RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 ATP5C1P36542 298 aaKnown RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 CLDN8P56748 225 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 SEC61GP60059 68 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 HSF1Q00613 529 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 MAB21L1Q13394 359 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 EXOSC7Q15024 291 aaKnown RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 HERC3Q15034 1050 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 ZSWIM7Q19AV6 140 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 KLHL40Q2TBA0 621 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 SLC9C1Q4G0N8 1177 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 FSCBQ5H9T9 825 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 TCERG1LQ5VWI1 586 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 OR4A47Q6IF82 309 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 PRR5LQ6MZQ0 368 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 LINGO4Q6UY18 593 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 CENPUQ71F23 418 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 LIMS2Q7Z4I7 341 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 PALB2Q86YC2 1186 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 CHERPQ8IWX8 916 aaKnown RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 GPR137CQ8N3F9 429 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 GBGT1Q8N5D6 347 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 PPFIBP2Q8ND30 876 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 IRGQQ8WZA9 623 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 HIST1H2ACQ93077 130 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 MCUR1Q96AQ8 359 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 KIAA1143Q96AT1 154 aaPredicted RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 COQ2Q96H96 371 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 TMEM19Q96HH6 336 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 HPDLQ96IR7 371 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 RBM41Q96IZ5 413 aaKnown RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 ZFYVE19Q96K21 471 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 CCDC3Q9BQI4 270 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 NUSAP1Q9BXS6 441 aaKnown RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 SYNDIG1Q9H7V2 258 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 LHX3Q9UBR4 397 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 PISDQ9UG56 409 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 ZNF490Q9ULM2 529 aaPredicted RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 FZD1Q9UP38 647 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.87□□□□□ -1.63
VNN3-211ENST00000509351 LAMB4A4D0S4 1761 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 SNED1Q8TER0 1413 aa4.87□□□□□ -1.63
VNN3-211ENST00000509351 GAPDHSO14556 408 aaPredicted RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 CLN5O75503 358 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 NDUFB10O96000 172 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 ALPIP09923 528 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 GP9P14770 177 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 ANPEPP15144 967 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 AMD1P17707 334 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 ACRV1P26436 265 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 CD1BP29016 333 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 ALDH1B1P30837 517 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 LIMK2P53671 638 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 CRYBB1P53674 252 aaPredicted RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 MAZP56270 477 aaKnown RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 PDE1BQ01064 536 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 GABPAQ06546 454 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 ENPEPQ07075 957 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 DUSP6Q16828 381 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 DEFB115Q30KQ5 88 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 SPDYCQ5MJ68 293 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 PIK3CD-AS1Q5SR53 167 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 TRMT1LQ7Z2T5 733 aaKnown RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 PRUNE1Q86TP1 453 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 SLC22A16Q86VW1 577 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 SPATA24Q86W54 205 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 TMEM99Q8N816 258 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 COLGALT1Q8NBJ5 622 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 PIGCQ92535 297 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 VSTM2LQ96N03 204 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 MMTAG2Q9BU76 263 aaKnown RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 RBM24Q9BX46 236 aaKnown RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 SDCBP2Q9H190 292 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 MAP6D1Q9H9H5 199 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 PTPRCP08575 1304 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 RNF123Q5XPI4 1314 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 POLR2AP24928 1970 aaKnown RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 LOC105371242A0A075B767 164 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 TRBV5-3A0A0A0MS03 114 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 A0A0G2JLL6 359 aaPredicted RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 LOC100506127A0A0U1RQW1 187 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 TARM1B6A8C7 271 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 SMIM22K7EJ46 135 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 NDUFA7O95182 113 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 TXNDC12O95881 172 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 CT45A8P0DMV1 189 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 CT45A9P0DMV2 189 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 DBTP11182 482 aaKnown RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 EPHX2P34913 555 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 SFTPDP35247 375 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 STARP49675 285 aa4.86□□□□□ -1.63
VNN3-211ENST00000509351 EXOSC2Q13868 293 aaKnown RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 DHX34Q14147 1143 aaKnown RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 CTTNQ14247 550 aaKnown RBP4.86□□□□□ -1.63
VNN3-211ENST00000509351 HEPACAMQ14CZ8 416 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms