RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 SLC22A7Q9Y694 548 aa8.72□□□□□ -1.01
HTT-205ENST00000509043 LAMA2P24043 3122 aaKnown RBP8.71□□□□□ -1.01
HTT-205ENST00000509043 A0A1W2PRQ8 180 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 SH3D21A4FU49 640 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 OR5K3A6NET4 321 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 CCDC85CA6NKD9 419 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 C4orf51C9J302 202 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 PGRMC2O15173 223 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 RGS10O43665 173 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 B4GALT2O60909 372 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 H1F0P07305 194 aaKnown RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 ZNF888P0CJ79 500 aaPredicted RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 OR12D1P0DN82 309 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 IL7RP16871 459 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 ALOX12P18054 663 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 MAGP20916 626 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 CD27P26842 260 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 CALRP27797 417 aaKnown RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 CDC42P60953 191 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 RAB8AP61006 207 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 SLC35A2P78381 396 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 IL1RL1Q01638 556 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 COX10Q12887 443 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 EIF2B5Q13144 721 aaKnown RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 DGCR6Q14129 220 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 FZD2Q14332 565 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 SMAD2Q15796 467 aaKnown RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 NEDD8Q15843 81 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 DUSP7Q16829 419 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 PUS10Q3MIT2 529 aaKnown RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 FCRL6Q6DN72 434 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 GTF2IRD2BQ6EKJ0 949 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 XAF1Q6GPH4 301 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 LAIR2Q6ISS4 152 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 DHRS4L2Q6PKH6 230 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 CD300LDQ6UXZ3 194 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 TAF8Q7Z7C8 310 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 GTF2IRD2Q86UP8 949 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 SLC22A18ASQ8N1D0 253 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 ZNF687Q8N1G0 1237 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 AMER3Q8N944 861 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 NUP43Q8NFH3 380 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 BPIFB6Q8NFQ5 453 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 TOR1AIP2Q8NFQ8 470 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 CCL4L1Q8NHW4 92 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 ADAMTS18Q8TE60 1221 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 XAGE5Q8WWM1 108 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 TANKQ92844 425 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 MYDGFQ969H8 173 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 C12orf43Q96C57 262 aaKnown RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 C10orf90Q96M02 699 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 COL21A1Q96P44 957 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 DGCR6LQ9BY27 220 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 ACTRT3Q9BYD9 372 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 POLR2J2Q9GZM3 115 aaKnown RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 POLR2J3Q9H1A7 115 aaKnown RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 PRO3102Q9H379 93 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 SEMA6CQ9H3T2 930 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 SERHL2Q9H4I8 314 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 ANKRD19PQ9H560 264 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 GPN2Q9H9Y4 310 aaPredicted RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 FANCEQ9HB96 536 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 GIN1Q9NXP7 522 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 KCMF1Q9P0J7 381 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 C5AR2Q9P296 337 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 DAPP1Q9UN19 280 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 NDRG2Q9UN36 371 aaKnown RBP8.71□□□□□ -1.02
HTT-205ENST00000509043 DUSP12Q9UNI6 340 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 CYP8B1Q9UNU6 501 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 CA5BQ9Y2D0 317 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 DSPPQ9NZW4 1301 aa8.71□□□□□ -1.02
HTT-205ENST00000509043 A0A087WV62 115 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 A0A0G2JN53 185 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 PRAMEF25A6NGN4 478 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 ZNF99A8MXY4 864 aaPredicted RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 PPM1DO15297 605 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 NARSO43776 548 aaKnown RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 SRPX2O60687 465 aaPredicted RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 UGT2B17O75795 530 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 LGI1O95970 557 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 AK1P00568 194 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 HMGN2P05204 90 aaKnown RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 GUSBP08236 651 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 HOXB3P14651 431 aaPredicted RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 POLR2CP19387 275 aaPredicted RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 CCNA2P20248 432 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 GSTM3P21266 225 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 PRKAR1BP31321 381 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 KRT20P35900 424 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 POLR2IP36954 125 aaKnown RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 IFNGR2P38484 337 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 YAP1P46937 504 aaKnown RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 OR1E2P47887 323 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 MAN2A2P49641 1150 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 CASP9P55211 416 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 LIM2P55344 173 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 RPS26P62854 115 aaKnown RBP8.7□□□□□ -1.02
HTT-205ENST00000509043 HPCAP84074 193 aa8.7□□□□□ -1.02
HTT-205ENST00000509043 ALDH6A1Q02252 535 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms