RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 DPY19L1Q2PZI1 675 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 IL23RQ5VWK5 629 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 CES4AQ5XG92 561 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 FAM219BQ5XKK7 198 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 HLA-DQA1Q5Y7H0 255 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 B3GNTL1Q67FW5 361 aaPredicted RBP8.51□□□□□ -1.05
NUP54-207ENST00000508583 OGFOD2Q6N063 350 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 LINC00696Q6ZRV3 163 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 ACAD11Q709F0 780 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 SPATA19Q7Z5L4 167 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 TICAM1Q8IUC6 712 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 TAGAPQ8N103 731 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 ARMC10Q8N2F6 343 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 LIX1Q8N485 282 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 TMEM156Q8N614 296 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 C17orf47Q8NEP4 570 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.51□□□□□ -1.05
NUP54-207ENST00000508583 SLC22A8Q8TCC7 542 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 ZNF675Q8TD23 568 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 CKAP2Q8WWK9 683 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 PSMF1Q92530 271 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 HAS2Q92819 552 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 PNPLA2Q96AD5 504 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 TSSK3Q96PN8 268 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 UTP23Q9BRU9 249 aaKnown RBP8.51□□□□□ -1.05
NUP54-207ENST00000508583 BRINP2Q9C0B6 783 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 C20orf27Q9GZN8 174 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.51□□□□□ -1.057e-10■■■■■ 34.7
NUP54-207ENST00000508583 ZNF395Q9H8N7 513 aaPredicted RBP8.51□□□□□ -1.05
NUP54-207ENST00000508583 AKTIPQ9H8T0 292 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 PNPOQ9NVS9 261 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 SH3BP4Q9P0V3 963 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 HEY2Q9UBP5 337 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 MARCOQ9UEW3 520 aaPredicted RBP8.51□□□□□ -1.05
NUP54-207ENST00000508583 PRODH2Q9UF12 536 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 YARS2Q9Y2Z4 477 aaKnown RBP8.51□□□□□ -1.05
NUP54-207ENST00000508583 PIEZO2Q9H5I5 2752 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 TLN1Q9Y490 2541 aaKnown RBP8.51□□□□□ -1.05
NUP54-207ENST00000508583 KALRNO60229 2985 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 BOD1L1Q8NFC6 3051 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 OR5H15A6NDH6 313 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 GABRR3A8MPY1 467 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 CAPN14A8MX76 684 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 SCAMP2O15127 329 aaKnown RBP8.5□□□□□ -1.05
NUP54-207ENST00000508583 PDPK1O15530 556 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 IGKV3-11P04433 115 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 CELA2AP08217 269 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 KITP10721 976 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 IDO1P14902 403 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 CD46P15529 392 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 FEN1P39748 380 aaKnown RBP8.5□□□□□ -1.05
NUP54-207ENST00000508583 CYB561P49447 251 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 TMED10P49755 219 aaKnown RBP8.5□□□□□ -1.05
NUP54-207ENST00000508583 GPR143P51810 404 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 NCBP2P52298 156 aaKnown RBP eCLIP8.5□□□□□ -1.05
NUP54-207ENST00000508583 NRG3P56975 720 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 MLF1P58340 268 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 C21orf58P58505 322 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 DCAF7P61962 342 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 RNF4P78317 190 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 FUT7Q11130 342 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 MAP4K2Q12851 820 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 ZNF169Q14929 603 aaPredicted RBP8.5□□□□□ -1.05
NUP54-207ENST00000508583 RPS6KA2Q15349 733 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 INAQ16352 499 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 MPEG1Q2M385 716 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 PRICKLE4Q2TBC4 344 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 SOWAHCQ53LP3 525 aaPredicted RBP8.5□□□□□ -1.05
NUP54-207ENST00000508583 CPTPQ5TA50 214 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 CPAMD8Q8IZJ3 1885 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 SLC15A4Q8N697 577 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 VPS37AQ8NEZ2 397 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 CEP70Q8NHQ1 597 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 ACTRT2Q8TDY3 377 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 ZNF721Q8TF20 911 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 TMEM125Q96AQ2 219 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 PPWD1Q96BP3 646 aaKnown RBP8.5□□□□□ -1.05
NUP54-207ENST00000508583 CNRIP1Q96F85 164 aaPredicted RBP8.5□□□□□ -1.05
NUP54-207ENST00000508583 PPP1R36Q96LQ0 422 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 C3orf30Q96M34 536 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 C5orf34Q96MH7 638 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 ZNF681Q96N22 645 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 ZBTB18Q99592 522 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 C1orf50Q9BV19 199 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 CDCP1Q9H5V8 836 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 NEUROD4Q9HD90 331 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 SLAMF7Q9NQ25 335 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 ACSS1Q9NUB1 689 aaPredicted RBP8.5□□□□□ -1.05
NUP54-207ENST00000508583 MRGBPQ9NV56 204 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 TAS2R9Q9NYW1 312 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 MYOTQ9UBF9 498 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 ERVK-19Q9WJR5 959 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 PCDHGB6Q9Y5F9 930 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 USH1CQ9Y6N9 552 aa8.5□□□□□ -1.05
NUP54-207ENST00000508583 SMG1Q96Q15 3661 aaKnown RBP8.49□□□□□ -1.05
NUP54-207ENST00000508583 A0A087WV62 115 aa8.49□□□□□ -1.05
NUP54-207ENST00000508583 MYOCOSA0A1B0GUC4 107 aa8.49□□□□□ -1.05
NUP54-207ENST00000508583 C2orf92A0A1B0GVN3 265 aa8.49□□□□□ -1.05
NUP54-207ENST00000508583 TTC36A6NLP5 189 aa8.49□□□□□ -1.05
NUP54-207ENST00000508583 A8MVJ9 347 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms