RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 BCAS2O75934 225 aaPredicted RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 IGKV3-11P04433 115 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 ICAM2P13598 275 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 CAPN3P20807 821 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 MAOAP21397 527 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 S1PR1P21453 382 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 SOX18P35713 384 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 EIF2S3P41091 472 aaKnown RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 MNAT1P51948 309 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 SOX8P57073 446 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 AP2B1P63010 937 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 HBA1P69905 142 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 PSPHP78330 225 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 CBX1P83916 185 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 FOXK2Q01167 660 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 MGAT2Q10469 447 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 CYLC2Q14093 348 aaPredicted RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 UBAP2LQ14157 1087 aaKnown RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 ERV3-1Q14264 604 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 MAPKAPK3Q16644 382 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 ZNF628Q5EBL2 1059 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 EXOSC6Q5RKV6 272 aaKnown RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 FHL5Q5TD97 284 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 AP1ARQ63HQ0 302 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 OR4F3Q6IEY1 312 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 ZCCHC12Q6PEW1 402 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 HACD2Q6Y1H2 254 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 LIAT1Q6ZQX7 453 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 CPEB2Q7Z5Q1 589 aaKnown RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 RAB43Q86YS6 212 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 TREML1Q86YW5 311 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 OR2L13Q8N349 312 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 TRIML2Q8N7C3 387 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 C17orf47Q8NEP4 570 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 OR7G1Q8NGA0 311 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 SFXN5Q8TD22 340 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 PTPMT1Q8WUK0 201 aaPredicted RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 SNRNP27Q8WVK2 155 aaKnown RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 KCNE4Q8WWG9 221 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 THAP4Q8WY91 577 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 UCN3Q969E3 161 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 GFM2Q969S9 779 aaKnown RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 EXOSC8Q96B26 276 aaKnown RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 ROPN1LQ96C74 230 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 IMMP1LQ96LU5 166 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 DGAT2Q96PD7 388 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 BBS4Q96RK4 519 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 WDR77Q9BQA1 342 aaPredicted RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 YIPF2Q9BWQ6 316 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 TRIM4Q9C037 500 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 CCDC86Q9H6F5 360 aaKnown RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 SOX17Q9H6I2 414 aaPredicted RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 GPN2Q9H9Y4 310 aaPredicted RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 SIRT3Q9NTG7 399 aaPredicted RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 GIN1Q9NXP7 522 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 MAT2BQ9NZL9 334 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 LEF1Q9UJU2 399 aaPredicted RBP8.07□□□□□ -1.12
USP46-207ENST00000508499 ERVK-11Q9UQG0 969 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 HS3ST3B1Q9Y662 390 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 EXPH5Q8NEV8 1989 aa8.07□□□□□ -1.12
USP46-207ENST00000508499 A0A087WV48 116 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 A0A096LPI6 279 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 TTC36A6NLP5 189 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 OR6C76A6NM76 312 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 ANGPT2O15123 496 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 TLX3O43711 291 aaPredicted RBP8.06□□□□□ -1.12
USP46-207ENST00000508499 DYRK3O43781 588 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 HNRNPCL1O60812 293 aaKnown RBP8.06□□□□□ -1.12
USP46-207ENST00000508499 ERAL1O75616 437 aaKnown RBP8.06□□□□□ -1.12
USP46-207ENST00000508499 CDC123O75794 336 aaPredicted RBP8.06□□□□□ -1.12
USP46-207ENST00000508499 DDAH2O95865 285 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 HPP00738 406 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 ABCB1P08183 1280 aaPredicted RBP8.06□□□□□ -1.12
USP46-207ENST00000508499 COX6A1P12074 109 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 COX4I1P13073 169 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 LIFP15018 202 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 SPINK2P20155 84 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 NCBP2P52298 156 aaKnown RBP eCLIP8.06□□□□□ -1.12
USP46-207ENST00000508499 MANFP55145 182 aaKnown RBP8.06□□□□□ -1.12
USP46-207ENST00000508499 DUSP2Q05923 314 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 VAC14Q08AM6 782 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 PCOLCEQ15113 449 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 EXT1Q16394 746 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 PGS1Q32NB8 556 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 VPS26BQ4G0F5 336 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 TIGD2Q4W5G0 525 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 PLAG1Q6DJT9 500 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 C8orf82Q6P1X6 216 aaPredicted RBP8.06□□□□□ -1.12
USP46-207ENST00000508499 BHLHB9Q6PI77 547 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 BRICD5Q6PL45 260 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 KIRREL2Q6UWL6 708 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 DLEU7Q6UYE1 221 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 RIPOR1Q6ZS17 1223 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 NDUFAF7Q7L592 441 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 GPR155Q7Z3F1 870 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 PPP1R32Q7Z5V6 425 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 CCDC116Q8IYX3 515 aa8.06□□□□□ -1.12
USP46-207ENST00000508499 VWA5B2Q8N398 1253 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms