RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 RIIAD1A6NNX1 92 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PGRMC2O15173 223 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR1I1O60431 355 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 STK16O75716 305 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR7A10O76100 309 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CHRM5P08912 532 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CKMT1AP12532 417 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CDH1P12830 882 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 UGT2B7P16662 529 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ALOX12P18054 663 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TFEBP19484 476 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OGDHQ02218 1023 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SP140Q13342 867 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SSPNQ14714 243 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CASP8Q14790 479 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PAPD7Q5XG87 772 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TMPRSS9Q7Z410 1059 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 STX12Q86Y82 276 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SIRT6Q8N6T7 355 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GSTCDQ8NEC7 633 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PHOSPHO1Q8TCT1 267 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CREB3L4Q8TEY5 395 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 FUBP1Q96AE4 644 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PDXPQ96GD0 296 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF419Q96HQ0 510 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TRAPPC9Q96Q05 1148 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ERGIC2Q96RQ1 377 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CCL19Q99731 98 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 WDR77Q9BQA1 342 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NAA11Q9BSU3 229 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CST11Q9H112 138 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ARL8BQ9NVJ2 186 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ASB6Q9NWX5 421 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ANKRD10Q9NXR5 420 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CCDC167Q9P0B6 97 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ARMCX1Q9P291 453 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CLEC4AQ9UMR7 237 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ABCG2Q9UNQ0 655 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 C19orf53Q9UNZ5 99 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 VWA8A3KMH1 1905 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 FAM237AA0A1B0GTK4 181 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SH2D7A6NKC9 451 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CENPBD1B2RD01 187 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NPIPA5E9PKD4 350 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SMAD6O43541 496 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 UGT2B17O75795 530 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 LIPCP11150 499 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ETS1P14921 441 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 FASP25445 335 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RORAP35398 523 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CDK9P50750 372 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CDC20Q12834 499 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 DNASE1L3Q13609 305 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 FASTKQ14296 549 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SQLEQ14534 574 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 COX20Q5RI15 118 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 Q6ZNB5 142 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GCNT7Q6ZNI0 430 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 MSANTD1Q6ZTZ1 278 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 LDB1Q86U70 411 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SPACA3Q8IXA5 215 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 LINC00469Q8N7U9 141 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OR2A12Q8NGT7 310 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ANKRD7Q92527 254 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NARS2Q96I59 477 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ATP6V1G3Q96LB4 118 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RBP7Q96R05 134 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SECISBP2Q96T21 854 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ROPN1BQ9BZX4 212 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ROPN1Q9HAT0 212 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CLN6Q9NWW5 311 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 LYARQ9NX58 379 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GPRC5BQ9NZH0 403 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 DHCR7Q9UBM7 475 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NPIPA1Q9UND3 350 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PCDHGB1Q9Y5G3 927 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PCDHGA11Q9Y5H2 935 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 CSNK1G3Q9Y6M4 447 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TP53BP1Q12888 1972 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 IGHV5-10-1A0A0J9YXX1 117 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 HSBP1L1C9JCN9 74 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 APOC4-APOC2K7ER74 178 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 M0R129 80 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 ERVH48-1M5A8F1 160 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RAD51CO43502 376 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RGS10O43665 173 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 APOC2P02655 101 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GP1BAP07359 652 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 FAM87AP0C7U9 286 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 OGNP20774 298 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SERPINB1P30740 379 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GCH1P30793 250 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 EPHA5P54756 1037 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RPL38P63173 70 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 HSPB3Q12988 150 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RPE65Q16518 533 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PPP1R3AQ16821 1122 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 KCTD19Q17RG1 926 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PDCD4Q53EL6 469 aaKnown RBP2.81□□□□□ -1.96
NEDD4-208ENST00000508342 NCBP2-AS2Q69YL0 99 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms