RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 LRATO95237 230 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 INHBAP08476 426 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 RPS17P08708 135 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 RBP1P09455 135 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 RFPL3SP0C7P2 107 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 SLC35E2P0CK97 266 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 GALNSP34059 522 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 ARL1P40616 181 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 CCNG1P51959 295 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 TLE4Q04727 773 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 NTRK2Q16620 822 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 GGTA1PQ4G0N0 100 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 FRG2Q64ET8 278 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 ZNF585AQ6P3V2 769 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 DND1Q8IYX4 353 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 LRRC25Q8N386 305 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 NOA1Q8NC60 698 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 FAM13CQ8NE31 585 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 CHTF18Q8WVB6 975 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 FRG2BQ96QU4 278 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 SERPINI1Q99574 410 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 TTYH2Q9BSA4 534 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 MRPL1Q9BYD6 325 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 WDR41Q9HAD4 459 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 MCCC2Q9HCC0 563 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 ZFP64Q9NPA5 681 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 SPRR3Q9UBC9 169 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 CNOT11Q9UKZ1 510 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 BOKQ9UMX3 212 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 HCN1O60741 890 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 URI1O94763 535 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 CT62P0C5K7 136 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 GLI4P10075 376 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 SERPINB3P29508 390 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 SSTR4P31391 388 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 MAN2A2P49641 1150 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 TBL3Q12788 808 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 SLC10A1Q14973 349 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 WHAMMP3Q1A5X7 153 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 TSNAXIP1Q2TAA8 658 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 C10orf62Q5T681 223 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 FAM219BQ5XKK7 198 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 B3GNT6Q6ZMB0 384 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 RPS27LQ71UM5 84 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 GALNT12Q8IXK2 581 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 MMGT1Q8N4V1 131 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 ATP6V1E2Q96A05 226 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 SARAFQ96BY9 339 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 FMO2Q99518 471 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 CXorf21Q9HAI6 301 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 KCNJ16Q9NPI9 418 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 ADAM29Q9UKF5 820 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 TMCO1Q9UM00 188 aa11.96□□□□□ -0.49
HMGCS1-205ENST00000508319 HRNRQ86YZ3 2850 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 TRGV5A0A0B4J1U4 118 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 WDR1O75083 606 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 KLK1P06870 262 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 SBK3P0C264 359 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 PIK3R1P27986 724 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 ADH7P40394 386 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 SERPINB9P50453 376 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 FUT7Q11130 342 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 RPS6KA2Q15349 733 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 TMEM64Q6YI46 380 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 TAOK1Q7L7X3 1001 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 TAGAPQ8N103 731 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 METTL4Q8N3J2 472 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 TMEM151AQ8N4L1 468 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 ZNF615Q8N8J6 731 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 OR4F6Q8NGB9 312 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 NEIL3Q8TAT5 605 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 DCAKDQ8WVC6 231 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 MRPL57Q9BQC6 102 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 DOHHQ9BU89 302 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 TSPYL1Q9H0U9 437 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 SLC6A15Q9H2J7 730 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 MRPL46Q9H2W6 279 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 LDAHQ9H6V9 325 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 QPCTLQ9NXS2 382 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 CNIH4Q9P003 139 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 ZNF180Q9UJW8 692 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 ACAD8Q9UKU7 415 aa11.95□□□□□ -0.5
HMGCS1-205ENST00000508319 AKAP6Q13023 2319 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 A0A0G2JNJ9 132 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 C2orf92A0A1B0GVN3 265 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 ANKRD33BA6NCL7 494 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 A8MT66 165 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 FOXO6A8MYZ6 492 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 TRIM49D1C9J1S8 452 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 PPP6CO00743 305 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 SMIM24O75264 130 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 TRIM3O75382 744 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 KRT38O76015 456 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 COL6A2P12110 1019 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 CPMP14384 443 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 CAPN3P20807 821 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 CNTFP26441 200 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 FBXW4P57775 412 aa11.94□□□□□ -0.5
HMGCS1-205ENST00000508319 GALNT1Q10472 559 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms