RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 EFNA3P52797 238 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 SF3A3Q12874 501 aaKnown RBP eCLIP18.74■□□□□ 0.59
USP53-203ENST00000507597 ZNF267Q14586 743 aaPredicted RBP18.74■□□□□ 0.59
USP53-203ENST00000507597 FAM174BQ3ZCQ3 159 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 BORAQ6PGQ7 559 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 BHLHB9Q6PI77 547 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 VWA5B2Q8N398 1253 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 CPSF7Q8N684 471 aaKnown RBP18.74■□□□□ 0.59
USP53-203ENST00000507597 OR5L2Q8NGL0 311 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 OR1N1Q8NGS0 311 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 TSPEARQ8WU66 669 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 PTPMT1Q8WUK0 201 aaPredicted RBP18.74■□□□□ 0.59
USP53-203ENST00000507597 SENP5Q96HI0 755 aaPredicted RBP18.74■□□□□ 0.59
USP53-203ENST00000507597 CNTNAP3BQ96NU0 1288 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 AMDHD1Q96NU7 426 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 CNPPD1Q9BV87 410 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 CNTNAP3Q9BZ76 1288 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 OR8D2Q9GZM6 311 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 GLIPR2Q9H4G4 154 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 PTGFRNQ9P2B2 879 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 PRODH2Q9UF12 536 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 PPIEQ9UNP9 301 aaKnown RBP18.74■□□□□ 0.59
USP53-203ENST00000507597 MYOCOSA0A1B0GUC4 107 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 OR6C76A6NM76 312 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 COQ9O75208 318 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 ZFAND5O76080 213 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 GPX3P22352 226 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 ITGA3P26006 1051 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 SOX8P57073 446 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 PRICKLE4Q2TBC4 344 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 AGKQ53H12 422 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 ANKRD26P1Q6NSI1 321 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 PAOXQ6QHF9 649 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 GPR155Q7Z3F1 870 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 PIGWQ7Z7B1 504 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 TRIML2Q8N7C3 387 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 OR8K3Q8NH51 312 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 SLC2A12Q8TD20 617 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 MOAP1Q96BY2 351 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 OR52E6Q96RD3 313 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 WDR77Q9BQA1 342 aaPredicted RBP18.73■□□□□ 0.59
USP53-203ENST00000507597 DEFB126Q9BYW3 111 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 LHPPQ9H008 270 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 CCDC167Q9P0B6 97 aa18.73■□□□□ 0.59
USP53-203ENST00000507597 APC2O95996 2303 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 A0A087WV62 115 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 CCDC154A6NI56 674 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 PLOD2O00469 737 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 CDK2AP1O14519 115 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 DCTN3O75935 186 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 PRR5P85299 388 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 ZNF750Q32MQ0 723 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 ZNF385BQ569K4 471 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 SPANXN4Q5MJ08 99 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 ATP1A1-AS1Q5TC04 95 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 OR4F3Q6IEY1 312 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 HSDL2Q6YN16 418 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 RNF111Q6ZNA4 994 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 SLC29A4Q7RTT9 530 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 GALNT16Q8N428 558 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 SLC5A8Q8N695 610 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 NCLNQ969V3 563 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 TAS2R9Q9NYW1 312 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 BTNL2Q9UIR0 455 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 ERVK-19Q9WJR5 959 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 KCNMB2Q9Y691 235 aa18.72■□□□□ 0.59
USP53-203ENST00000507597 NDUFAB1O14561 156 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 PLOD3O60568 738 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 PRAMEF2O60811 474 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 SOX30O94993 753 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 ALPPP05187 535 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 FUT7Q11130 342 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 HSPB3Q12988 150 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 MAPKAPK3Q16644 382 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 ST3GAL2Q16842 350 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 HLA-DQA1Q5Y7H0 255 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 FAM180BQ6P0A1 224 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 NFAM1Q8NET5 270 aaPredicted RBP18.71■□□□□ 0.59
USP53-203ENST00000507597 OR9A2Q8NGT5 310 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 SUN3Q8TAQ9 357 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 ELP5Q8TE02 316 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 CIDECQ96AQ7 238 aaPredicted RBP18.71■□□□□ 0.59
USP53-203ENST00000507597 THOC3Q96J01 351 aaKnown RBP18.71■□□□□ 0.59
USP53-203ENST00000507597 ARHGAP9Q9BRR9 750 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 SEMA4CQ9C0C4 833 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 DDX18Q9NVP1 670 aaKnown RBP18.71■□□□□ 0.59
USP53-203ENST00000507597 MAT2BQ9NZL9 334 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 ABI3Q9P2A4 366 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 BCAP29Q9UHQ4 241 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 CAPN7Q9Y6W3 813 aa18.71■□□□□ 0.59
USP53-203ENST00000507597 TTC36A6NLP5 189 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 DDAH2O95865 285 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 CCL11P51671 97 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 PSPHP78330 225 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 RHDQ02161 417 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 SPDYE7PQ495Y7 208 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 ZNF628Q5EBL2 1059 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 BLOC1S3Q6QNY0 202 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 CCDC197Q8NCU1 140 aa18.7■□□□□ 0.58
USP53-203ENST00000507597 ADCY4Q8NFM4 1077 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms