RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 STARD5Q9NSY2 213 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 PAK5Q9P286 719 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 IL20RAQ9UHF4 553 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 KLK13Q9UKR3 277 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 CCPG1Q9ULG6 757 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 ODF2LQ9ULJ1 636 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.78□□□□□ -1.96
LSM6-205ENST00000507449 PLEKHA6Q9Y2H5 1048 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 SLC6A5Q9Y345 797 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 ATG4BQ9Y4P1 393 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 PRSS21Q9Y6M0 314 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 RAD54L2Q9Y4B4 1467 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 IGHV3-16A0A0C4DH30 117 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 ARHGAP42A6NI28 874 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 RPL37AP8A6NKH3 93 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 C19orf81C9J6K1 198 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 PDHXO00330 501 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 ARPC1BO15143 372 aaKnown RBP2.77□□□□□ -1.97
LSM6-205ENST00000507449 CRLF1O75462 422 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 PTBP3O95758 552 aaKnown RBP2.77□□□□□ -1.97
LSM6-205ENST00000507449 MT-ATP6P00846 226 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 OAS1P00973 400 aaKnown RBP2.77□□□□□ -1.97
LSM6-205ENST00000507449 PDGFBP01127 241 aaPredicted RBP2.77□□□□□ -1.97
LSM6-205ENST00000507449 CGAP01215 116 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 PROS1P07225 676 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 HIST1H2AGP0C0S8 130 aaPredicted RBP2.77□□□□□ -1.97
LSM6-205ENST00000507449 OR9G9P0C7N8 305 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 MBL2P11226 248 aaPredicted RBP2.77□□□□□ -1.97
LSM6-205ENST00000507449 CCNA2P20248 432 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 LMO2P25791 158 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 CAPGP40121 348 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 CD86P42081 329 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 CAMLGP49069 296 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 NPY2RP49146 381 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 VEGFCP49767 419 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 ZNF131P52739 623 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 SSTP61278 116 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 TRADDQ15628 312 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 LPAL2Q16609 132 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 ZSWIM7Q19AV6 140 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 HKDC1Q2TB90 917 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 AGKQ53H12 422 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 CCDC92Q53HC0 331 aaPredicted RBP2.77□□□□□ -1.97
LSM6-205ENST00000507449 C9orf66Q5T8R8 295 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 REG3GQ6UW15 175 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 ZSCAN30Q86W11 494 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 AMZ2Q86W34 360 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 RNF130Q86XS8 419 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.77□□□□□ -1.97
LSM6-205ENST00000507449 LINC00518Q8N0U6 118 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 KDM8Q8N371 416 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 LRRC17Q8N6Y2 441 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 C17orf47Q8NEP4 570 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 RDH11Q8TC12 318 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 DQX1Q8TE96 717 aaKnown RBP2.77□□□□□ -1.97
LSM6-205ENST00000507449 HIST1H2ACQ93077 130 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 NSMCE2Q96MF7 247 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 FAM111AQ96PZ2 611 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 ATOH8Q96SQ7 321 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 ATF6BQ99941 703 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 TRIM51Q9BSJ1 452 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 ST6GALNAC5Q9BVH7 336 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 FTHL17Q9BXU8 183 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 NLNQ9BYT8 704 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 C1orf21Q9H246 121 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 Q9HAA7 133 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 HPS4Q9NQG7 708 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 SOHLH2Q9NX45 425 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 CNOT2Q9NZN8 540 aaKnown RBP2.77□□□□□ -1.97
LSM6-205ENST00000507449 VPS54Q9P1Q0 977 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 LHX3Q9UBR4 397 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 CLIP2Q9UDT6 1046 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 MIOXQ9UGB7 285 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 IKZF3Q9UKT9 509 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 ENTPD4Q9Y227 616 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 FBXO7Q9Y3I1 522 aa2.77□□□□□ -1.97
LSM6-205ENST00000507449 UBE4BO95155 1302 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 A0A0A6YYD4 124 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 TEX48A0A1B0GUV7 120 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 SRRM5B3KS81 715 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 SHISA9B4DS77 424 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 TXNL1O43396 289 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 STAM2O75886 525 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 HPRP00739 348 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 APRTP07741 180 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 CCDC192P0DO97 292 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 GNSP15586 552 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 FUT1P19526 365 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 IL10P22301 178 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 HSPA1LP34931 641 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 SLC1A4P43007 532 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 SLC6A8P48029 635 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 KARSQ15046 597 aaKnown RBP2.76□□□□□ -1.97
LSM6-205ENST00000507449 PCK2Q16822 640 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 ZNF699Q32M78 642 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 CCDC40Q4G0X9 1142 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 TCHHL1Q5QJ38 904 aaPredicted RBP2.76□□□□□ -1.97
LSM6-205ENST00000507449 RFWD3Q6PCD5 774 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 FAM159AQ6UWV7 190 aa2.76□□□□□ -1.97
LSM6-205ENST00000507449 METTL7BQ6UX53 244 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms